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A8LQV1 (A8LQV1_DINSH) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
DNA topoisomerase IV, B subunit EMBL ABV92494.1
EC=5.99.1.3 EMBL ABV92494.1
Gene names
Ordered Locus Names:Dshi_0749
OrganismDinoroseobacter shibae (strain DFL 12) [Complete proteome] [HAMAP]
Taxonomic identifier398580 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Dinoroseobacter

Protein attributes

Sequence length654 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the type II topoisomerase family. RuleBase RU000380

Sequences

Sequence LengthMass (Da)Tools
A8LQV1 [UniParc].

Last modified December 4, 2007. Version 1.
Checksum: 32611EC69018A57D

FASTA65471,639
        10         20         30         40         50         60 
MANDLLSGAR ADTAATYDAS SIQVLEDMEH VRLRPGMYIG GKDDRALHHM VAEIIDNSMD 

        70         80         90        100        110        120 
EAVAGHATWI EVELHANGHV SVRDNGRGIP TDPHPKTPDK SALEVIFCTL NAGGKFSGDS 

       130        140        150        160        170        180 
YETSGGLHGV GSSVVNALSD HLRVEVARNR ELYAMEFSRG VPQGKLAKIG AAPNRRGTAV 

       190        200        210        220        230        240 
TFHPDPEIFG SLALKPARLF KMARSKAYLF SGVEIRWKTA IDDGDTPEEA TFHFPGGLSD 

       250        260        270        280        290        300 
YLNETLGQAA TYADAPFSGT VSFEKFGRPG KVEWAINWTP ARDGFIQSYC NTVPTPEGGT 

       310        320        330        340        350        360 
HEAGFWAAIL KGIKAYGELV SNRKASTITR EDLITGAGAL VSCFIREPEF VGQTKDRLAT 

       370        380        390        400        410        420 
VEAQRMVENA VRDHFDNWLA ADTKSAGAIL DFLVLRAEER LRRRQEKETA RKSATKRLRL 

       430        440        450        460        470        480 
PGKLVDCSAT NRAGTELFIV EGDSAGGSAK MARDRKTQAL LPLRGKILNV LGAASSKLGS 

       490        500        510        520        530        540 
NQEISDLTQA LGVGLGSKFN IEDLRYDKII IMTDADVDGA HIASLLMTFF FTQMRPMIDA 

       550        560        570        580        590        600 
GHLYLACPPL FRLTQGAKRV YCLDEAERDA WLEKGLGGKG KIDVSRFKGL GEMDAKDLKD 

       610        620        630        640        650 
TTMNPETRKL IRVSIDEDEP GETGDLVERL MGKKPEKRFE YIQENARFVE ELDV

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000830 Genomic DNA. Translation: ABV92494.1.
RefSeqYP_001532095.1. NC_009952.1.

3D structure databases

ProteinModelPortalA8LQV1.
ModBaseSearch...

Protein-protein interaction databases

STRINGA8LQV1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5711184.
GenomeReviewsGene locus Dshi_0749 in contig CP000830_GR.
KEGGdsh:Dshi_0749.
PATRIC21814017. VBIDinShi9476_0768.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG304889.
OMAQARDKEF.
ProtClustDBPRK05559.

Family and domain databases

InterProIPR003594. ATPase-like_ATP-bd.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
IPR001241. Topo_IIA.
IPR013759. Topo_IIA_B/N_ab.
IPR002288. Topo_IIA_B_C.
IPR013506. Topo_IIA_bsu_dom2.
IPR013760. Topo_IIA_cen.
IPR018522. TopoIIA_CS.
IPR005737. TopoIV_B_Gneg.
[Graphical view]
Gene3DG3DSA:3.30.565.10. ATP_bd_ATPase. 1 hit.
G3DSA:3.30.230.10. Ribosomal_S5_D2-type_fold. 1 hit.
G3DSA:3.40.50.670. Topo_IIA_B/N_ab. 1 hit.
KOK02622.
PfamPF00204. DNA_gyraseB. 1 hit.
PF00986. DNA_gyraseB_C. 1 hit.
PF02518. HATPase_c. 1 hit.
[Graphical view]
PRINTSPR00418. TPI2FAMILY.
SMARTSM00387. HATPase_c. 1 hit.
SM00433. TOP2c. 1 hit.
[Graphical view]
SUPFAMSSF55874. ATP_bd_ATPase. 1 hit.
SSF54211. Ribosomal_S5_D2-typ_fold. 1 hit.
SSF56719. Topo_IIA_cen. 1 hit.
TIGRFAMsTIGR01055. ParE_Gneg. 1 hit.
PROSITEPS00177. TOPOISOMERASE_II. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA8LQV1_DINSH
AccessionPrimary (citable) accession number: A8LQV1
Entry history
Integrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: January 25, 2012
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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