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Protein
Submitted name:

Response regulator

Gene

Dshi_3485

Organism
Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciDSHI398580:GKEL-3526-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Response regulatorImported
Gene namesi
Ordered Locus Names:Dshi_3485Imported
OrganismiDinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12)Imported
Taxonomic identifieri398580 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeDinoroseobacter
ProteomesiUP000006833 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi398580.Dshi_3485.

Structurei

3D structure databases

ProteinModelPortaliA8LPF3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3706.
HOGENOMiHOG000291805.
OMAiWLAPSLY.
OrthoDBiEOG69GZGV.

Family and domain databases

InterProiIPR011006. CheY-like_superfamily.
IPR001932. PPM-type_phosphatase_dom.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamiPF00072. Response_reg. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF52172. SSF52172. 1 hit.
SSF81606. SSF81606. 1 hit.
PROSITEiPS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A8LPF3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIPNVQSPTH PPETSAGRRL QVLVVDDSRL QRRILSMALK KKGYDVFEAE
60 70 80 90 100
DGNHGFEIFS QNHIDIVISD WMMPGLSGPD LCRKLRAVES EHYVYIILLT
110 120 130 140 150
TKSEKDEIAQ GFDAGADDFL SKPVHAVELM ARITAGERVM RMERELTTKN
160 170 180 190 200
HLISETLAEL KTLYHALDSD LIEAKKLQQS LVRDKTGTFG RADLALMLKS
210 220 230 240 250
SGHVGGDLVG FFPINDFEVG LYSLDVSGHG VSSALMTARL AGVLSGSMPG
260 270 280 290 300
KNIAIEADGA GQPVGRDPGA VAADLNRLLL EEMETEHYFT IMLGILNIDT
310 320 330 340 350
GVLRMVQAGH PHGHLLRNGA GSDLLGEGGL PIGLLDAADY TSFTATLAPG
360 370 380 390 400
DRVLLVSDGF TECTDPAGNM LDDEGLAAWF AQHRDLDGPA LMDILPRDLE
410 420
RFAQSTDFGD DISALVLDFG RG
Length:422
Mass (Da):45,720
Last modified:December 4, 2007 - v1
Checksum:iD37B7F36A4B3174E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000830 Genomic DNA. Translation: ABV95218.1.
RefSeqiWP_012180142.1. NC_009952.1.

Genome annotation databases

EnsemblBacteriaiABV95218; ABV95218; Dshi_3485.
KEGGidsh:Dshi_3485.
PATRICi21819781. VBIDinShi9476_3619.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000830 Genomic DNA. Translation: ABV95218.1.
RefSeqiWP_012180142.1. NC_009952.1.

3D structure databases

ProteinModelPortaliA8LPF3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi398580.Dshi_3485.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABV95218; ABV95218; Dshi_3485.
KEGGidsh:Dshi_3485.
PATRICi21819781. VBIDinShi9476_3619.

Phylogenomic databases

eggNOGiCOG3706.
HOGENOMiHOG000291805.
OMAiWLAPSLY.
OrthoDBiEOG69GZGV.

Enzyme and pathway databases

BioCyciDSHI398580:GKEL-3526-MONOMER.

Family and domain databases

InterProiIPR011006. CheY-like_superfamily.
IPR001932. PPM-type_phosphatase_dom.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamiPF00072. Response_reg. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF52172. SSF52172. 1 hit.
SSF81606. SSF81606. 1 hit.
PROSITEiPS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 16493 / NCIMB 14021 / DFL 12Imported.

Entry informationi

Entry nameiA8LPF3_DINSH
AccessioniPrimary (citable) accession number: A8LPF3
Entry historyi
Integrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: July 22, 2015
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.