A8LLU9 (A8LLU9_DINSH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Agmatinase EMBL ABV93477.1
EC=3.5.3.11 EMBL ABV93477.1

Gene names

Name:	speB EMBL ABV93477.1
Ordered Locus Names:	Dshi_1735

Organism

Dinoroseobacter shibae (strain DFL 12) [Complete proteome] [HAMAP]

Taxonomic identifier

398580 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Dinoroseobacter

Protein attributes

Sequence length	324 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Manganese By similarity. RuleBase RU003684
Sequence similarities	Belongs to the arginase family. RuleBase RU003684

Ontologies

Keywords
Ligand	Manganese RuleBase RU003684 Metal-binding SAAS SAAS005925 RuleBase RU003684
Molecular function	Hydrolase RuleBase RU003684 SAAS SAAS005925 EMBL ABV93477.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	agmatinase activity Inferred from electronic annotation. Source: EC metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A8LLU9 [UniParc]. Last modified December 4, 2007. Version 1. Checksum: 8664476A1043D6D1	FASTA	324	34,336
	10 20 30 40 50 60 MALEDAGGEV DGAFTRPDPR GLSYEAAYGG ALSFLRRRYT KELSGVDVAV SGVPFDLSVT 70 80 90 100 110 120 NRPGCRLGPR AIREASSLQP FDPPYGWGFD PLSEFTVVDY GDLAFDYGRA AGFPAALEAH 130 140 150 160 170 180 IRTILAAGAA PLTMGGDHYI SYPILRALAE VHGPLSLLQF DAHSDTWPDE DRDRLDHGTM 190 200 210 220 230 240 FYKAVKDGLI DPARSVQVGI RTTNDTDLGF HVIDAREVHE AGAAAVAAKV RGILGDHKTY 250 260 270 280 290 300 LTFDIDCLDP GTAPGTGTPV WGGLSAGQAA ILLRDLAGIT VVGGDVVEVS PPYDPSGATA 310 320 VAGAHVMTEI LCLWAWTRRK GGQA

References

[1]

"The complete genome sequence of the algal symbiont Dinoroseobacter shibae: a hitchhiker's guide to life in the sea." Wagner-Dobler I., Ballhausen B., Berger M., Brinkhoff T., Buchholz I., Bunk B., Cypionka H., Daniel R., Drepper T., Gerdts G., Hahnke S., Han C., Jahn D., Kalhoefer D., Kiss H., Klenk H.P., Kyrpides N., Liebl W. , Liesegang H., Meincke L., Pati A., Petersen J., Piekarski T., Pommerenke C., Pradella S., Pukall R., Rabus R., Stackebrandt E., Thole S., Thompson L., Tielen P., Tomasch J., von Jan M., Wanphrut N., Wichels A., Zech H., Simon M. ISME J. 4:61-77(2010) [PubMed: 19741735] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DFL 12.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000830 Genomic DNA. Translation: ABV93477.1.
RefSeq	YP_001533078.1. NC_009952.1.
3D structure databases
ProteinModelPortal	A8LLU9.
ModBase	Search...
Protein-protein interaction databases
STRING	A8LLU9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5713302.
GenomeReviews	Gene locus Dshi_1735 in contig CP000830_GR.
KEGG	dsh:Dshi_1735.
PATRIC	21816109. VBIDinShi9476_1802.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG391953.
OMA	TSFMRRR.
ProtClustDB	PRK02190.
Family and domain databases
InterPro	IPR005925. Agmatinase-rel. IPR006035. Ureohydrolase. IPR023696. Ureohydrolase_domain. IPR020855. Ureohydrolase_Mn_BS. [Graphical view]
Gene3D	G3DSA:3.40.800.10. Ureohydrolase. 1 hit.
KO	K01480.
PANTHER	PTHR11358. Ureohydrolase. 1 hit.
Pfam	PF00491. Arginase. 1 hit. [Graphical view]
PIRSF	PIRSF036979. Arginase. 1 hit.
TIGRFAMs	TIGR01230. Agmatinase. 1 hit.
PROSITE	PS01053. ARGINASE_1. 1 hit. PS51409. ARGINASE_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A8LLU9_DINSH

Accession

Primary (citable) accession number: A8LLU9

Entry history

Integrated into UniProtKB/TrEMBL:	December 4, 2007
Last sequence update:	December 4, 2007
Last modified:	December 14, 2011
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)