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A8LLG2

- EFTU_DINSH

UniProt

A8LLG2 - EFTU_DINSH

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Protein

Elongation factor Tu

Gene
tuf1, Dshi_0223
tuf2, Dshi_0274
Organism
Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity.UniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi19 – 268GTP By similarity
Nucleotide bindingi76 – 805GTP By similarity
Nucleotide bindingi131 – 1344GTP By similarity

GO - Molecular functioni

  1. GTPase activity Source: InterPro
  2. GTP binding Source: UniProtKB-HAMAP
  3. translation elongation factor activity Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Elongation factor

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

GTP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciDSHI398580:GKEL-222-MONOMER.
DSHI398580:GKEL-274-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Elongation factor Tu
Short name:
EF-Tu
Gene namesi
Name:tuf1
Ordered Locus Names:Dshi_0223
AND
Name:tuf2
Ordered Locus Names:Dshi_0274
OrganismiDinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12)
Taxonomic identifieri398580 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeDinoroseobacter
ProteomesiUP000006833: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 391391Elongation factor TuUniRule annotationPRO_0000337373Add
BLAST

Proteomic databases

PRIDEiA8LLG2.

Interactioni

Subunit structurei

Monomer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi398580.Dshi_0274.

Structurei

3D structure databases

ProteinModelPortaliA8LLG2.
SMRiA8LLG2. Positions 2-390.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini10 – 201192tr-type GAdd
BLAST

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni19 – 268G1 By similarity
Regioni55 – 595G2 By similarity
Regioni76 – 794G3 By similarity
Regioni131 – 1344G4 By similarity
Regioni169 – 1713G5 By similarity

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0050.
HOGENOMiHOG000229290.
KOiK02358.
OMAiISAPAAC.
OrthoDBiEOG6R5C6X.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_00118_B. EF_Tu_B.
InterProiIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEiPS00301. G_TR_1. 1 hit.
PS51722. G_TR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A8LLG2-1 [UniParc]FASTAAdd to Basket

« Hide

MAKEKFERSK PHVNIGTIGH VDHGKTTLTA AITKQFGDFK AYDEIDGAPE    50
EKARGITIST AHVEYETDAR HYAHVDCPGH ADYVKNMITG AAQMDGAILV 100
VNAADGPMPQ TREHILLGRQ VGIPYMVVFM NKVDQVDDEE LLELVEMEIR 150
ELLSSYEYPG DDIPIIAGSA LAALEGRDPE IGEQKIAELM KAVDDYIPTP 200
ARAVDQPFLM PIEDVFSISG RGTVVTGRVE RGVINVGDEI EIVGIRDTKK 250
TTCTGVEMFR KLLDRGEAGD NIGALLRGVD REGVERGQVL CKPGSVTPHT 300
KFEAEAYILT KEEGGRHTPF FANYRPQFYF RTTDVTGTVT LPEGTEMVMP 350
GDNLKFGVEL IAPIAMEDGL RFAIREGGRT VGAGVVSKII E 391
Length:391
Mass (Da):42,777
Last modified:December 4, 2007 - v1
Checksum:iB701ECE5949571A1
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000830 Genomic DNA. Translation: ABV91972.1.
CP000830 Genomic DNA. Translation: ABV92023.1.
RefSeqiWP_012176905.1. NC_009952.1.
YP_001531573.1. NC_009952.1.
YP_001531624.1. NC_009952.1.

Genome annotation databases

EnsemblBacteriaiABV91972; ABV91972; Dshi_0223.
ABV92023; ABV92023; Dshi_0274.
GeneIDi5711524.
5712148.
KEGGidsh:Dshi_0223.
dsh:Dshi_0274.
PATRICi21812891. VBIDinShi9476_0221.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000830 Genomic DNA. Translation: ABV91972.1 .
CP000830 Genomic DNA. Translation: ABV92023.1 .
RefSeqi WP_012176905.1. NC_009952.1.
YP_001531573.1. NC_009952.1.
YP_001531624.1. NC_009952.1.

3D structure databases

ProteinModelPortali A8LLG2.
SMRi A8LLG2. Positions 2-390.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 398580.Dshi_0274.

Proteomic databases

PRIDEi A8LLG2.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABV91972 ; ABV91972 ; Dshi_0223 .
ABV92023 ; ABV92023 ; Dshi_0274 .
GeneIDi 5711524.
5712148.
KEGGi dsh:Dshi_0223.
dsh:Dshi_0274.
PATRICi 21812891. VBIDinShi9476_0221.

Phylogenomic databases

eggNOGi COG0050.
HOGENOMi HOG000229290.
KOi K02358.
OMAi ISAPAAC.
OrthoDBi EOG6R5C6X.

Enzyme and pathway databases

BioCyci DSHI398580:GKEL-222-MONOMER.
DSHI398580:GKEL-274-MONOMER.

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
HAMAPi MF_00118_B. EF_Tu_B.
InterProi IPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view ]
Pfami PF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view ]
PRINTSi PR00315. ELONGATNFCT.
SUPFAMi SSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEi PS00301. G_TR_1. 1 hit.
PS51722. G_TR_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 16493 / NCIMB 14021 / DFL 12.

Entry informationi

Entry nameiEFTU_DINSH
AccessioniPrimary (citable) accession number: A8LLG2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: December 4, 2007
Last modified: September 3, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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