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A8LJI8

- DEOD_DINSH

UniProt

A8LJI8 - DEOD_DINSH

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Protein
Purine nucleoside phosphorylase DeoD-type
Gene
deoD, Dshi_2858
Organism
Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate.UniRule annotation
Purine deoxynucleoside + phosphate = purine + 2'-deoxy-alpha-D-ribose 1-phosphate.UniRule annotation

GO - Molecular functioni

  1. purine-nucleoside phosphorylase activity Source: UniProtKB-HAMAP
Complete GO annotation...

GO - Biological processi

  1. purine nucleoside metabolic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Enzyme and pathway databases

BioCyciDSHI398580:GKEL-2896-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Purine nucleoside phosphorylase DeoD-type (EC:2.4.2.1)
Short name:
PNP
Gene namesi
Name:deoD
Ordered Locus Names:Dshi_2858
OrganismiDinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12)
Taxonomic identifieri398580 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeDinoroseobacter
ProteomesiUP000006833: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 234234Purine nucleoside phosphorylase DeoD-typeUniRule annotation
PRO_1000186183Add
BLAST

Interactioni

Subunit structurei

Homohexamer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi398580.Dshi_2858.

Structurei

3D structure databases

ProteinModelPortaliA8LJI8.
SMRiA8LJI8. Positions 1-232.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0813.
HOGENOMiHOG000274896.
KOiK03784.
OMAiFYDERPD.
OrthoDBiEOG6BKJC5.

Family and domain databases

Gene3Di3.40.50.1580. 1 hit.
HAMAPiMF_01627. Pur_nucleosid_phosp.
InterProiIPR004402. DeoD-type.
IPR018017. Nucleoside_phosphorylase.
IPR018016. Nucleoside_phosphorylase_CS.
IPR000845. Nucleoside_phosphorylase_d.
[Graphical view]
PANTHERiPTHR21234. PTHR21234. 1 hit.
PfamiPF01048. PNP_UDP_1. 1 hit.
[Graphical view]
SUPFAMiSSF53167. SSF53167. 1 hit.
TIGRFAMsiTIGR00107. deoD. 1 hit.
PROSITEiPS01232. PNP_UDP_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A8LJI8-1 [UniParc]FASTAAdd to Basket

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MTIHIGAAPG DIAETVLMPG DPLRAKWAAE TFLDDPVCVN EVRGMLGFTG    50
TWCGHRVTIH GSGMGMPSLS IYANELITEY GAQTLIRIGS TGAMQNHVAL 100
RDVILAMTCS SISTPSSGIF CELNFAPCAD WGLLKAAEAA AGAKGTKTHV 150
GGIYSSDVFY DERPDLTEQM IRHGVLGVEM EAAELYTLAA RHGRRALAVL 200
TVSDHLLTHD ALPSAERQSS FGDMVEIALE AAFA 234
Length:234
Mass (Da):24,878
Last modified:December 4, 2007 - v1
Checksum:i6148ED7E8561D513
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000830 Genomic DNA. Translation: ABV94591.1.
RefSeqiWP_012179519.1. NC_009952.1.
YP_001534192.1. NC_009952.1.

Genome annotation databases

EnsemblBacteriaiABV94591; ABV94591; Dshi_2858.
GeneIDi5710709.
KEGGidsh:Dshi_2858.
PATRICi21818491. VBIDinShi9476_2977.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000830 Genomic DNA. Translation: ABV94591.1 .
RefSeqi WP_012179519.1. NC_009952.1.
YP_001534192.1. NC_009952.1.

3D structure databases

ProteinModelPortali A8LJI8.
SMRi A8LJI8. Positions 1-232.
ModBasei Search...

Protein-protein interaction databases

STRINGi 398580.Dshi_2858.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABV94591 ; ABV94591 ; Dshi_2858 .
GeneIDi 5710709.
KEGGi dsh:Dshi_2858.
PATRICi 21818491. VBIDinShi9476_2977.

Phylogenomic databases

eggNOGi COG0813.
HOGENOMi HOG000274896.
KOi K03784.
OMAi FYDERPD.
OrthoDBi EOG6BKJC5.

Enzyme and pathway databases

BioCyci DSHI398580:GKEL-2896-MONOMER.

Family and domain databases

Gene3Di 3.40.50.1580. 1 hit.
HAMAPi MF_01627. Pur_nucleosid_phosp.
InterProi IPR004402. DeoD-type.
IPR018017. Nucleoside_phosphorylase.
IPR018016. Nucleoside_phosphorylase_CS.
IPR000845. Nucleoside_phosphorylase_d.
[Graphical view ]
PANTHERi PTHR21234. PTHR21234. 1 hit.
Pfami PF01048. PNP_UDP_1. 1 hit.
[Graphical view ]
SUPFAMi SSF53167. SSF53167. 1 hit.
TIGRFAMsi TIGR00107. deoD. 1 hit.
PROSITEi PS01232. PNP_UDP_1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 16493 / NCIMB 14021 / DFL 12.

Entry informationi

Entry nameiDEOD_DINSH
AccessioniPrimary (citable) accession number: A8LJI8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 28, 2009
Last sequence update: December 4, 2007
Last modified: September 3, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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