A8LI70 (A8LI70_DINSH) Unreviewed, UniProtKB/TrEMBL
Last modified
December 14, 2011.
Version 28.
History...
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Submitted name: 5-aminolevulinic acid synthase EMBL ABV92924.1 EC=2.3.1.37 EMBL ABV92924.1 | ||||
| Gene names |
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| Organism | Dinoroseobacter shibae (strain DFL 12) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 398580 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Dinoroseobacter |
Protein attributes
| Sequence length | 407 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Cofactor | Pyridoxal phosphate By similarity. RuleBase RU003693 |
| Sequence similarities | Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003693 |
Ontologies
| Keywords | |
|---|---|
| Ligand | Pyridoxal phosphate RuleBase RU003693 |
| Molecular function | Acyltransferase EMBL ABV92924.1 Transferase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | tetrapyrrole biosynthetic process Inferred from electronic annotation. Source: InterPro |
| Molecular function | 5-aminolevulinate synthase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate bindingInferred from electronic annotation. Source: InterPro transferase activity, transferring nitrogenous groupsInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequences
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References
| [1] | "The complete genome sequence of the algal symbiont Dinoroseobacter shibae: a hitchhiker's guide to life in the sea." Wagner-Dobler I., Ballhausen B., Berger M., Brinkhoff T., Buchholz I., Bunk B., Cypionka H., Daniel R., Drepper T., Gerdts G., Hahnke S., Han C., Jahn D., Kalhoefer D., Kiss H., Klenk H.P., Kyrpides N., Liebl W. Simon M.ISME J. 4:61-77(2010) [PubMed: 19741735] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DFL 12. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP000830 Genomic DNA. Translation: ABV92924.1. |
| RefSeq | YP_001532525.1. NC_009952.1. |
3D structure databases | |
| ProteinModelPortal | A8LI70. |
| SMR | A8LI70. Positions 1-396. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | A8LI70. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 5711950. |
| GenomeReviews | Gene locus Dshi_1182 in contig CP000830_GR. |
| KEGG | dsh:Dshi_1182. |
| PATRIC | 21814949. VBIDinShi9476_1228. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | HBG649839. |
| OMA | ISSKERD. |
| ProtClustDB | PRK09064. |
Family and domain databases | |
| InterPro | IPR010961. 4pyrrol_synth_NH2levulA_synth. IPR001917. Aminotrans_II_pyridoxalP_BS. IPR004839. Aminotransferase_I/II. IPR015424. PyrdxlP-dep_Trfase_major_dom. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view] |
| Gene3D | G3DSA:3.40.640.10. PyrdxlP-dep_Trfase_major_sub1. 1 hit. G3DSA:3.90.1150.10. PyrdxlP-dep_Trfase_major_sub2. 1 hit. |
| KO | K00643. |
| Pfam | PF00155. Aminotran_1_2. 1 hit. [Graphical view] |
| SUPFAM | SSF53383. PyrdxlP-dep_Trfase_major. 1 hit. |
| TIGRFAMs | TIGR01821. 5aminolev_synth. 1 hit. |
| PROSITE | PS00599. AA_TRANSFER_CLASS_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | A8LI70_DINSH | ||||||||
| Accession | Primary (citable) accession number: A8LI70 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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