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A8LHY8

- A8LHY8_DINSH

UniProt

A8LHY8 - A8LHY8_DINSH

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Protein
Submitted name: DNA ligase
Gene
Dshi_2589
Organism
Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciDSHI398580:GKEL-2626-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:Dshi_2589Imported
OrganismiDinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12)Imported
Taxonomic identifieri398580 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeDinoroseobacter
ProteomesiUP000006833: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi398580.Dshi_2589.

Structurei

3D structure databases

ProteinModelPortaliA8LHY8.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK01971.
OMAiNRHKSGV.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A8LHY8-1 [UniParc]FASTAAdd to Basket

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MKDFAALFTS LDQTTKITPK VAALAAYFRT APEEDRLWTI ALLSGRRPKR    50
TVTTTRLREW AAERAGIPLW LFEEAYPVVG DLAETIALVL PPPTRTSTRS 100
LTDWITTIRG LAARDEPDRR AEILAAWDSL PETERFVFNK LITGGFRMGV 150
SAKLMTRALS QATDIPEPEL AHRLMGDWTP ETTSFQSLVL TRDPAADLSK 200
PYPFYLAYGL EDPPDTLGPP ADWQAEHKWD GIRGQLILRG GQHFVWSRGE 250
ELMTDRFPEL AALRDFLPDG TVLDGELLAW DYNGAGDAPL PFNALQKRIG 300
RKTVPKKLLS EAPVILRAYD LLEDGGTDLR DRPLSERRAR LEALAAALPD 350
TLPLRLSPTL TFDSWDALAQ IRAKSREMGA EGIMLKRRAS PYLAGRKKGD 400
WWKWKVDPLT IDAVMIYAQA GHGRRANLFT DYTFAVWDGN ELVPFTKAYS 450
GLTDAEFRQI TAWVRKNTLE RFGPVRRVTP EHVFEIAFEG IQASPRHKSG 500
VALRFPRMLR WRKDKPLQEA NTLEDLKGML EVYG 534
Length:534
Mass (Da):60,295
Last modified:December 4, 2007 - v1
Checksum:iFD761EE0EAF72232
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000830 Genomic DNA. Translation: ABV94322.1.
RefSeqiYP_001533923.1. NC_009952.1.

Genome annotation databases

EnsemblBacteriaiABV94322; ABV94322; Dshi_2589.
GeneIDi5713487.
KEGGidsh:Dshi_2589.
PATRICi21817925. VBIDinShi9476_2695.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000830 Genomic DNA. Translation: ABV94322.1 .
RefSeqi YP_001533923.1. NC_009952.1.

3D structure databases

ProteinModelPortali A8LHY8.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 398580.Dshi_2589.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABV94322 ; ABV94322 ; Dshi_2589 .
GeneIDi 5713487.
KEGGi dsh:Dshi_2589.
PATRICi 21817925. VBIDinShi9476_2695.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000036007.
KOi K01971.
OMAi NRHKSGV.
OrthoDBi EOG6Q8HXT.

Enzyme and pathway databases

BioCyci DSHI398580:GKEL-2626-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 16493 / NCIMB 14021 / DFL 12.

Entry informationi

Entry nameiA8LHY8_DINSH
AccessioniPrimary (citable) accession number: A8LHY8
Entry historyi
Integrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: May 14, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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