A8LCF8 (A8LCF8_FRASN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycoside hydrolase 15-related EMBL ABW09597.1

Gene names

Ordered Locus Names:

Franean1_0130

Organism

Frankia sp. (strain EAN1pec) [Complete proteome] [HAMAP] EMBL ABW09597.1

Taxonomic identifier

298653 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Frankiaceae › Frankia

Protein attributes

Sequence length	636 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABW09597.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	polysaccharide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	glucan 1,4-alpha-glucosidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A8LCF8 [UniParc]. Last modified December 4, 2007. Version 1. Checksum: AE05284731F1F8CB	FASTA	636	71,333
	10 20 30 40 50 60 MAHTPTRRGG GSPFPPIAEY GFLSDCETNC LVAPSGNVEW MCVPRPDAPS VFGAVLDRSA 70 80 90 100 110 120 GGFRFGPDRT FIPAGRRYLP GTNVLETTWQ TPTGWLIVTD CLVVGRWHRT HRRSKTHRRT 130 140 150 160 170 180 PGDWDADHVL LRLARCEHGD VDLSLVCEPN FDYGRSPASW RYEDEDYSTG IITHDFPAGD 190 200 210 220 230 240 PAAGVALRLR TDLRLGFDGR RALARTTLRE GDTAFVAMTW RAEDPLLPGN YPQACAAVDS 250 260 270 280 290 300 TTEFWRQWLS RGRFPDHPWR RHLQRSALAL KGLTYAPTGA LLAAATTSLP ETPQGERNWD 310 320 330 340 350 360 YRYSWIRDST FALWGLYTLG LDYEANDFFS FIADVAEHAD DIQVMYRVGG EPKIDEEILG 370 380 390 400 410 420 HLSGYDGAVP VRVGNEAAKQ RQHDVWGAVL DSVYLHTRSR DYLSERLWPV LVRLVEAAAA 430 440 450 460 470 480 HWRETDRGMW EVRGEPRHFT SSKMFCWVAL DRGRRLAQMR GDLRTAGRWD DIADEIHADV 490 500 510 520 530 540 LANGVDHRGV FTQYYGSTSL DASVLLMPLL GFLPSTDDRV KATVLAIADE LTVDGLVLRY 550 560 570 580 590 600 RTDETDDGVE GEEGAFLICS FWLVSALVEI GELTRARQLC ERLLSLASPL DLYAEEIDPA 610 620 630 DGRHLGNFPQ AFTHLALINA VMYVIRAESG ESFTRS

References

[1]

"Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography." Normand P., Lapierre P., Tisa L.S., Gogarten J.P., Alloisio N., Bagnarol E., Bassi C.A., Berry A.M., Bickhart D.M., Choisne N., Couloux A., Cournoyer B., Cruveiller S., Daubin V., Demange N., Francino M.P., Goltsman E., Huang Y. , Kopp O.R., Labarre L., Lapidus A., Lavire C., Marechal J., Martinez M., Mastronunzio J.E., Mullin B.C., Niemann J., Pujic P., Rawnsley T., Rouy Z., Schenowitz C., Sellstedt A., Tavares F., Tomkins J.P., Vallenet D., Valverde C., Wall L.G., Wang Y., Medigue C., Benson D.R. Genome Res. 17:7-15(2007) [PubMed: 17151343] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000820 Genomic DNA. Translation: ABW09597.1.
RefSeq	YP_001504503.1. NC_009921.1.
3D structure databases
ProteinModelPortal	A8LCF8.
ModBase	Search...
Protein-protein interaction databases
STRING	A8LCF8.
Protein family/group databases
CAZy	GH15. Glycoside Hydrolase Family 15.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5668555.
GenomeReviews	Gene locus Franean1_0130 in contig CP000820_GR.
KEGG	fre:Franean1_0130.
PATRIC	21933004. VBIFraSp51419_0131.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG553151.
OMA	VEWMCVP.
ProtClustDB	CLSK872058.
Family and domain databases
InterPro	IPR008928. 6-hairpin_glycosidase-like. IPR012341. 6hp_glycosidase. IPR011613. Glyco_hydro_15. [Graphical view]
Gene3D	G3DSA:1.50.10.10. CelA/Cel48F_cat. 1 hit.
Pfam	PF00723. Glyco_hydro_15. 1 hit. [Graphical view]
SUPFAM	SSF48208. Glyco_trans_6hp. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A8LCF8_FRASN

Accession

Primary (citable) accession number: A8LCF8

Entry history

Integrated into UniProtKB/TrEMBL:	December 4, 2007
Last sequence update:	December 4, 2007
Last modified:	January 25, 2012
This is version 19 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)