Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent

Preferred order of sections

Names and origin

Protein names

Submitted name:
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent EMBL ABW10689.1
EC=1.17.4.1 EMBL ABW10689.1

Gene names

Ordered Locus Names:

Franean1_1235

Organism

Frankia sp. (strain EAN1pec) [Complete proteome] [HAMAP] EMBL ABW10689.1

Taxonomic identifier

298653 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Frankiaceae › Frankia

Protein attributes

Sequence length	1011 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Oxidoreductase EMBL ABW10689.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	DNA replication Inferred from electronic annotation. Source: InterPro
Cellular component	ribonucleoside-diphosphate reductase complex Inferred from electronic annotation. Source: InterPro
Molecular function	cobalamin binding Inferred from electronic annotation. Source: InterPro cobalt ion binding Inferred from electronic annotation. Source: InterPro nucleotide binding Inferred from electronic annotation. Source: InterPro ribonucleoside-diphosphate reductase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

Sequence

Length

Mass (Da)

Tools

A8L6K7 [UniParc].

Last modified December 4, 2007. Version 1.
Checksum: 4FAA9E5C26054F07
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FASTA

1,011

107,582

        10         20         30         40         50         60 
MTETRGKGNR SAAKVAGLKI RRVRTTPGVH PYDEVEWESR DVVMTNWRDG SVNFEQRGVE 

        70         80         90        100        110        120 
FPTAWSVNAS NIVASKYFRG ALGSPDRESS LRQLIDRVVL RYGAAGREHG YFASESDAEI 

       130        140        150        160        170        180 
FEHELTWMLL HQVFSFNSPV WFNVGTAAPQ QVSACFILAV DDTMESILNW YREEGLIFKG 

       190        200        210        220        230        240 
GSGAGLNLSR IRSSKELLSS GGTASGPVSF MRGADASAGT IKSGGATRRA AKMVVLDVDH 

       250        260        270        280        290        300 
PDVVEFVETK AREEDKIRAL RDAGFDMDLG GRDIASVQYQ NANNSVRVND EFMRAVVDGT 

       310        320        330        340        350        360 
SFDLRARLDN RVIESVDARG LFRTISQAAW ECADPGIQYD GTINDWHTCP ESGRISASNP 

       370        380        390        400        410        420 
CSEYVHLDNS SCNLASLNLM KFLRPDRTFD TETFVASVEL IITAMDISIC FADFPTPEIT 

       430        440        450        460        470        480 
KVTRAYRQLG IGYANLGALL MASARAYDSD GGRALAAAIT SLMTATAYRR SAELAGTVGA 

       490        500        510        520        530        540 
YDGFARNADA HRRVVRKHSA ANDAVRTVHA EEARLITAAS KEWERALSVG EKHGWRNAQV 

       550        560        570        580        590        600 
SLLAPTGTIG LAMDCDTTGI EPDLALVKMK KLVGGASMKI VNQTVPAALR ALGYAEETIE 

       610        620        630        640        650        660 
AIVEYIAEHG HVVDAPGLRT EHYEVFDCAI GDRAISPMGH VRMMAAVQPF LSGAISKTVN 

       670        680        690        700        710        720 
MPATATVAEV EEIYLEGWRL GLKALAIYRD NCKVGQPLTD VKGAKRDAAA AAEVASDVAA 

       730        740        750        760        770        780 
RAAAGAAAAV AAAPSAVTAQ PAVGPGAPGP HWPAGPGEHR PVRRRLPKTR PSQTVSFSVG 

       790        800        810        820        830        840 
GAEGYMTAGS YPDDGLGEVF IKMSKQGSTL AGVMDAFSIA VSIALQYGVP LEAYVSKFIN 

       850        860        870        880        890        900 
MRFEPAGMTD DPDVRIAQSI MDYLFRRLAL DYLTEEQRAE LGILSASERT RRLSDQAGGG 

       910        920        930        940        950        960 
PAAAAEPEID IESLRASAPA EGDSDPAATA GAAPARSAPA RSAPGGSAPA GPGVGGGPEL 

       970        980        990       1000       1010 
VAQELRLAMP GGSLTAQTVV DAPLCFTCGV NMRPAGSCYV CEQCGSTSGC S

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References

[1]

"Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography."
Normand P., Lapierre P., Tisa L.S., Gogarten J.P., Alloisio N., Bagnarol E., Bassi C.A., Berry A.M., Bickhart D.M., Choisne N., Couloux A., Cournoyer B., Cruveiller S., Daubin V., Demange N., Francino M.P., Goltsman E., Huang Y.

Benson D.R.
Genome Res. 17:7-15(2007) [PubMed: 17151343] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000820 Genomic DNA. Translation: ABW10689.1.
RefSeq	YP_001505595.1. NC_009921.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A8L6K7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5669648.
GenomeReviews	Gene locus Franean1_1235 in contig CP000820_GR.
KEGG	fre:Franean1_1235.
PATRIC	21935334. VBIFraSp51419_1281.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG414188.
OMA	FLWRSVP.
ProtClustDB	PRK06556.
Family and domain databases
InterPro	IPR013344. RDP_Rdtase_AdoCbl-dep. IPR000788. Ribncl_red_lg_C. IPR013678. Ribonuc_red_2_N. IPR024434. TSCPD_dom. [Graphical view]
KO	K00525.
Pfam	PF08471. Ribonuc_red_2_N. 1 hit. PF02867. Ribonuc_red_lgC. 1 hit. PF12637. TSCPD. 1 hit. [Graphical view]
PRINTS	PR01183. RIBORDTASEM1.
TIGRFAMs	TIGR02504. NrdJ_Z. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A8L6K7_FRASN

Accession

Primary (citable) accession number: A8L6K7

Entry history

Integrated into UniProtKB/TrEMBL:	December 4, 2007
Last sequence update:	December 4, 2007
Last modified:	December 14, 2011
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Preferred order of sections

Names and origin

Protein attributes

Ontologies

Sequences

References

Cross-references

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Family and domain databases

Entry information