A8L6D3 (A8L6D3_FRASN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
30S ribosomal protein S2 HAMAP MF_00291

Gene names

Name:	rpsB HAMAP MF_00291
Ordered Locus Names:	Franean1_1161

Organism

Frankia sp. (strain EAN1pec) [Complete proteome] [HAMAP] EMBL ABW10615.1

Taxonomic identifier

298653 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Frankiaceae › Frankia

Protein attributes

Sequence length	300 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein S2P family. HAMAP MF_00291

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein HAMAP MF_00291 EMBL ABW10615.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: HAMAP
Cellular component	small ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A8L6D3 [UniParc]. Last modified December 4, 2007. Version 1. Checksum: 197AC1CA4759B8F6	FASTA	300	32,807
	10 20 30 40 50 60 MAVVTMKQLL ESGVHFGHQT KRWNPKMKRY IFTERNGIYI IDLQQTLSYI DRAYDFVKET 70 80 90 100 110 120 VAHGGTVLFI GTKKQAQEAI EEQAQRVGMP FVKERWLGGM LTNFSTVYKR LQRLKELEEI 130 140 150 160 170 180 ELTGGTEVRT KKEQLVLTRE KAKLERTLGG IRDMARVPSA VWVVDTKKEH IAVGEARKLG 190 200 210 220 230 240 IPVVAILDTN CDPDEVDYPI PGNDDAIRSA ALLTRVVADA VAEGLMSRAG ASSNAEAKPE 250 260 270 280 290 300 QSTGEEPLAE WEQALLRGDA AAEAPAAPVA AEAAEPTEAV AAVETATEEQ PQPDAVGTAV

References

[1]

"Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography." Normand P., Lapierre P., Tisa L.S., Gogarten J.P., Alloisio N., Bagnarol E., Bassi C.A., Berry A.M., Bickhart D.M., Choisne N., Couloux A., Cournoyer B., Cruveiller S., Daubin V., Demange N., Francino M.P., Goltsman E., Huang Y. , Kopp O.R., Labarre L., Lapidus A., Lavire C., Marechal J., Martinez M., Mastronunzio J.E., Mullin B.C., Niemann J., Pujic P., Rawnsley T., Rouy Z., Schenowitz C., Sellstedt A., Tavares F., Tomkins J.P., Vallenet D., Valverde C., Wall L.G., Wang Y., Medigue C., Benson D.R. Genome Res. 17:7-15(2007) [PubMed: 17151343] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000820 Genomic DNA. Translation: ABW10615.1.
RefSeq	YP_001505521.1. NC_009921.1.
3D structure databases
ProteinModelPortal	A8L6D3.
SMR	A8L6D3. Positions 6-225.
ModBase	Search...
Protein-protein interaction databases
STRING	A8L6D3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5669574.
GenomeReviews	Gene locus Franean1_1161 in contig CP000820_GR.
KEGG	fre:Franean1_1161.
PATRIC	21935178. VBIFraSp51419_1203.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG736296.
OMA	KQAQDSV.
ProtClustDB	PRK05299.
Family and domain databases
HAMAP	MF_00291_B. Ribosomal_S2_B. [Tree]
InterPro	IPR001865. Ribosomal_S2. IPR005706. Ribosomal_S2_bac/mit/plastid. IPR018130. Ribosomal_S2_CS. IPR023591. Ribosomal_S2_flav_dom. [Graphical view]
KO	K02967.
PANTHER	PTHR12534. Ribosom_S2_bac. 1 hit.
Pfam	PF00318. Ribosomal_S2. 1 hit. [Graphical view]
PRINTS	PR00395. RIBOSOMALS2.
SUPFAM	SSF52313. Ribosomal_S2. 1 hit.
TIGRFAMs	TIGR01011. RpsB_bact. 1 hit.
PROSITE	PS00962. RIBOSOMAL_S2_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A8L6D3_FRASN

Accession

Primary (citable) accession number: A8L6D3

Entry history

Integrated into UniProtKB/TrEMBL:	December 4, 2007
Last sequence update:	December 4, 2007
Last modified:	December 14, 2011
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)