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A8L3Z0 (A8L3Z0_FRASN) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
1,4-alpha-glucan branching enzyme GlgB HAMAP MF_00685
EC=2.4.1.18 HAMAP MF_00685
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase HAMAP MF_00685
Alpha-(1->4)-glucan branching enzyme HAMAP MF_00685
Glycogen branching enzyme HAMAP MF_00685
Gene names
Name:glgB HAMAP MF_00685
Ordered Locus Names:Franean1_1049
OrganismFrankia sp. (strain EAN1pec) [Complete proteome] [HAMAP] EMBL ABW10505.1
Taxonomic identifier298653 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Frankiaceae › Frankia

Protein attributes

Sequence length755 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position By similarity. HAMAP MF_00685

Catalytic activity

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain. HAMAP MF_00685 SAAS SAAS006407

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP MF_00685 SAAS SAAS006407

Subunit structure

Monomer By similarity. HAMAP MF_00685

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. HAMAP MF_00685

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site3991Nucleophile By similarity HAMAP MF_00685
Active site4521Proton donor By similarity HAMAP MF_00685

Sequences

Sequence LengthMass (Da)Tools
A8L3Z0 [UniParc].

Last modified December 4, 2007. Version 1.
Checksum: E6F4277F22F009E4

FASTA75582,982
        10         20         30         40         50         60 
MLDRLAGGAH HDPHGVLGAH PTRGWTVIRA LRPDATAVTV LVDGTRHPMT RLHSGGIFAV 

        70         80         90        100        110        120 
AVPGGIPDYR FEVTYPDSTH VVDDPYQHLP TLGEIDLHLI GEGRHERLWH VLGAHVRRLD 

       130        140        150        160        170        180 
RGPGGGGGGG TVAGVSFAVW APNARGVRVV GDFDFWDGRG FPMRSLGSSG VWELFVPGIG 

       190        200        210        220        230        240 
AGTRYKYEIL GSDGVWRQKA DPLAFATEQP PATASVVHES SYTWDDAAWL ERRASIPWHA 

       250        260        270        280        290        300 
APVSVYEVHL ASWRRGLSYL ELAEQLVEYV RENGFTHVEM LPVAEHPFGG SWGYQVTSYY 

       310        320        330        340        350        360 
APTSRFGSPD EFRHLVDALH AAGIGVIVDW VPAHFPRDAF ALGRFDGTPL YEHPDPRRGE 

       370        380        390        400        410        420 
QPDWGTYVFD FGRSEVRNFL VANALYWLEE FHVDGLRVDA VASMLYLDYS RPSGEWVPNA 

       430        440        450        460        470        480 
HGGRENLEAV SLLQEVNATV YRRVPGAMMI AEESTAWPGV TRPTHLGGLG FGFKWNMGWM 

       490        500        510        520        530        540 
HDTLDYSSRA PLFRTYHHHQ MTFSLMYAFS ENFVLPFSHD EVVHGKGSLL RKMPGDRRAQ 

       550        560        570        580        590        600 
LANLRALYGY MWAHPGKQLL FMGCEFAQDN EWSEATSLDW HLLGEAGHGG VARLVRDLNH 

       610        620        630        640        650        660 
TYREIPALWE RDSDPSGFSW IDASDAENNV FAFVRWGEDG ERALACVTNF AGVGQVGYRL 

       670        680        690        700        710        720 
GFPFPGRWRE VLNTDALDYG GGGMGNLGGI TAVADPSHGL PASAALSLPP LGTVWFVHEP 

       730        740        750 
ADGGPAGDGP SADGQTDNEL TASEPADGVR SDPEA

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000820 Genomic DNA. Translation: ABW10505.1.
RefSeqYP_001505411.1. NC_009921.1.

3D structure databases

ProteinModelPortalA8L3Z0.
SMRA8L3Z0. Positions 105-720.
ModBaseSearch...

Protein-protein interaction databases

STRINGA8L3Z0.

Protein family/group databases

CAZyCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5669463.
GenomeReviewsGene locus Franean1_1049 in contig CP000820_GR.
KEGGfre:Franean1_1049.
PATRIC21934932. VBIFraSp51419_1085.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG287139.
OMADGTCLYE.
ProtClustDBPRK05402.

Family and domain databases

HAMAPMF_00685. GlgB.
[Tree]
InterProIPR006407. 1-4-A-glucan_branch_enz.
IPR006048. A-amylase_b_C.
IPR015902. Alpha_amylase.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
Gene3DG3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit.
G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
G3DSA:2.60.40.10. Ig-like_fold. 2 hits.
KOK00700.
PANTHERPTHR10357. Alpha_amylase. 1 hit.
PTHR10357:SF13. PTHR10357:SF13. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 2 hits.
[Graphical view]
PIRSFPIRSF000463. GlgB. 1 hit.
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
SSF81296. Ig_E-set. 1 hit.
TIGRFAMsTIGR01515. Branching_enzym. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA8L3Z0_FRASN
AccessionPrimary (citable) accession number: A8L3Z0
Entry history
Integrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: December 14, 2011
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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