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Protein

Glutamate decarboxylase

Gene

Franean1_6904

Organism
Frankia sp. (strain EAN1pec)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciFSP298653:GHPI-6940-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Ordered Locus Names:Franean1_6904Imported
OrganismiFrankia sp. (strain EAN1pec)Imported
Taxonomic identifieri298653 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeFrankiaceaeFrankia
ProteomesiUP000001313 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi298653.Franean1_6904.

Structurei

3D structure databases

ProteinModelPortaliA8L3H8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000070228.
KOiK01580.
OMAiDPDLVWD.
OrthoDBiEOG6TFCPW.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

A8L3H8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALHGRARGR RGDQAVEVRP HLVIPDEDGP VPRYRMPRSS MSAETAYQIV
60 70 80 90 100
RDELMLDGNA RLNLATFVTT WMDEHADRLM TECAAKNMID KDEYPQTAEL
110 120 130 140 150
EARCVNMLAD LWHAPDATDA VGCSTTGSSE ACMLAGLAML RRWRSTREPH
160 170 180 190 200
RGEQGGGQRG TGARPNIVMG ANVQVCWEKF ARYWDVEPRL MPLAPGRTHL
210 220 230 240 250
TAPEAVARCD ENTIGVVAVL GSTFDGTYEP VAEIVAALDQ LAASGGPDVP
260 270 280 290 300
VHVDGASGGF IAPFCDPDLV WDFRLERVVS INASGHKYGL VYPGVGWALW
310 320 330 340 350
RDARHLPAEL VFDVDYLGGS MPTFALNFSR PGAQVVAQYY SLLRLGRAGY
360 370 380 390 400
RHTARTCRDN ARWLADEIAK LGPFELISDG SGIPAFAFTT RDAAEFSVFE
410 420 430 440 450
VSEALRARGW LVPAYRFPPD LAELAVLRIV VRAEFSRDLA HLLVEDLHRV
460 470
VGRLSGPRWR TAAGGADLAS FHH
Length:473
Mass (Da):51,976
Last modified:December 4, 2007 - v1
Checksum:i866EB98934B5580B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000820 Genomic DNA. Translation: ABW16238.1.
RefSeqiWP_020464304.1. NC_009921.1.
YP_001511144.1. NC_009921.1.

Genome annotation databases

EnsemblBacteriaiABW16238; ABW16238; Franean1_6904.
KEGGifre:Franean1_6904.
PATRICi21947558. VBIFraSp51419_7370.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000820 Genomic DNA. Translation: ABW16238.1.
RefSeqiWP_020464304.1. NC_009921.1.
YP_001511144.1. NC_009921.1.

3D structure databases

ProteinModelPortaliA8L3H8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi298653.Franean1_6904.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABW16238; ABW16238; Franean1_6904.
KEGGifre:Franean1_6904.
PATRICi21947558. VBIFraSp51419_7370.

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000070228.
KOiK01580.
OMAiDPDLVWD.
OrthoDBiEOG6TFCPW.

Enzyme and pathway databases

BioCyciFSP298653:GHPI-6940-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: EAN1pecImported.

Entry informationi

Entry nameiA8L3H8_FRASN
AccessioniPrimary (citable) accession number: A8L3H8
Entry historyi
Integrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: April 1, 2015
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.