A8L3H8 (A8L3H8_FRASN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glutamate decarboxylase EMBL ABW16238.1

Gene names

Ordered Locus Names:

Franean1_6904

Organism

Frankia sp. (strain EAN1pec) [Complete proteome] [HAMAP] EMBL ABW16238.1

Taxonomic identifier

298653 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Frankiaceae › Frankia

Protein attributes

Sequence length	473 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A8L3H8 [UniParc]. Last modified December 4, 2007. Version 1. Checksum: 866EB98934B5580B	FASTA	473	51,976
	10 20 30 40 50 60 MALHGRARGR RGDQAVEVRP HLVIPDEDGP VPRYRMPRSS MSAETAYQIV RDELMLDGNA 70 80 90 100 110 120 RLNLATFVTT WMDEHADRLM TECAAKNMID KDEYPQTAEL EARCVNMLAD LWHAPDATDA 130 140 150 160 170 180 VGCSTTGSSE ACMLAGLAML RRWRSTREPH RGEQGGGQRG TGARPNIVMG ANVQVCWEKF 190 200 210 220 230 240 ARYWDVEPRL MPLAPGRTHL TAPEAVARCD ENTIGVVAVL GSTFDGTYEP VAEIVAALDQ 250 260 270 280 290 300 LAASGGPDVP VHVDGASGGF IAPFCDPDLV WDFRLERVVS INASGHKYGL VYPGVGWALW 310 320 330 340 350 360 RDARHLPAEL VFDVDYLGGS MPTFALNFSR PGAQVVAQYY SLLRLGRAGY RHTARTCRDN 370 380 390 400 410 420 ARWLADEIAK LGPFELISDG SGIPAFAFTT RDAAEFSVFE VSEALRARGW LVPAYRFPPD 430 440 450 460 470 LAELAVLRIV VRAEFSRDLA HLLVEDLHRV VGRLSGPRWR TAAGGADLAS FHH

References

[1]

"Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography." Normand P., Lapierre P., Tisa L.S., Gogarten J.P., Alloisio N., Bagnarol E., Bassi C.A., Berry A.M., Bickhart D.M., Choisne N., Couloux A., Cournoyer B., Cruveiller S., Daubin V., Demange N., Francino M.P., Goltsman E., Huang Y. , Kopp O.R., Labarre L., Lapidus A., Lavire C., Marechal J., Martinez M., Mastronunzio J.E., Mullin B.C., Niemann J., Pujic P., Rawnsley T., Rouy Z., Schenowitz C., Sellstedt A., Tavares F., Tomkins J.P., Vallenet D., Valverde C., Wall L.G., Wang Y., Medigue C., Benson D.R. Genome Res. 17:7-15(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: EAN1pec.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000820 Genomic DNA. Translation: ABW16238.1.
RefSeq	YP_001511144.1. NC_009921.1.
3D structure databases
ProteinModelPortal	A8L3H8.
ModBase	Search...
Protein-protein interaction databases
STRING	298653.Franean1_6904.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABW16238; ABW16238; Franean1_6904.
GeneID	5675217.
KEGG	fre:Franean1_6904.
PATRIC	21947558. VBIFraSp51419_7370.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0076.
HOGENOM	HOG000070228.
KO	K01580.
OMA	PMDKEHM.
ProtClustDB	CLSK947658.
Enzyme and pathway databases
BioCyc	FSP298653:GHPI-6943-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A8L3H8_FRASN

Accession

Primary (citable) accession number: A8L3H8

Entry history

Integrated into UniProtKB/TrEMBL:	December 4, 2007
Last sequence update:	December 4, 2007
Last modified:	May 1, 2013
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)