A8L1D3 (A8L1D3_FRASN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Short-chain dehydrogenase/reductase SDR EMBL ABW11665.1

Gene names

Ordered Locus Names:

Franean1_2230

Organism

Frankia sp. (strain EAN1pec) [Complete proteome] [HAMAP] EMBL ABW11665.1

Taxonomic identifier

298653 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Frankiaceae › Frankia

Protein attributes

Sequence length	238 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	nucleotide binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A8L1D3 [UniParc]. Last modified December 4, 2007. Version 1. Checksum: 39FE97AFB17569E7	FASTA	238	24,120
	10 20 30 40 50 60 MVENEGRVAL VTGGNRGIGA ACAAALAASG DRVAVASRGG EAPDGMLGVR MDVTSANSVD 70 80 90 100 110 120 KAFSEVEAAL GPVEIVVSNA GIVRDTLMLM MSEDSFRDVV DTNLLGAYRV AKRASRSMIR 130 140 150 160 170 180 RRNGRLIFIS SVVGLSGGPG QSNYAASKAG LVGFARSLAR ELGGRGITSN VIAPGPIRTD 190 200 210 220 230 MTDALTDAQR EFLVAATPAG RMGDPAEVAA AVVFLASQGA AYVNGAVIPV DGGAGMGH

References

[1]

"Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography." Normand P., Lapierre P., Tisa L.S., Gogarten J.P., Alloisio N., Bagnarol E., Bassi C.A., Berry A.M., Bickhart D.M., Choisne N., Couloux A., Cournoyer B., Cruveiller S., Daubin V., Demange N., Francino M.P., Goltsman E., Huang Y. , Kopp O.R., Labarre L., Lapidus A., Lavire C., Marechal J., Martinez M., Mastronunzio J.E., Mullin B.C., Niemann J., Pujic P., Rawnsley T., Rouy Z., Schenowitz C., Sellstedt A., Tavares F., Tomkins J.P., Vallenet D., Valverde C., Wall L.G., Wang Y., Medigue C., Benson D.R. Genome Res. 17:7-15(2007) [PubMed: 17151343] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000820 Genomic DNA. Translation: ABW11665.1.
RefSeq	YP_001506571.1. NC_009921.1.
3D structure databases
ProteinModelPortal	A8L1D3.
SMR	A8L1D3. Positions 4-238.
ModBase	Search...
Protein-protein interaction databases
STRING	A8L1D3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5670629.
GenomeReviews	Gene locus Franean1_2230 in contig CP000820_GR.
KEGG	fre:Franean1_2230.
PATRIC	21937378. VBIFraSp51419_2299.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG750976.
OMA	QLAMRMS.
ProtClustDB	CLSK948340.
Family and domain databases
InterPro	IPR002198. DH_sc/Rdtase_SDR. IPR002347. Glc/ribitol_DH. IPR016040. NAD(P)-bd_dom. IPR020904. Sc_DH/Rdtase_CS. [Graphical view]
Gene3D	G3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
KO	K00059.
Pfam	PF00106. adh_short. 1 hit. [Graphical view]
PRINTS	PR00081. GDHRDH. PR00080. SDRFAMILY.
PROSITE	PS00061. ADH_SHORT. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A8L1D3_FRASN

Accession

Primary (citable) accession number: A8L1D3

Entry history

Integrated into UniProtKB/TrEMBL:	December 4, 2007
Last sequence update:	December 4, 2007
Last modified:	January 25, 2012
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)