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A8L0J4 (A8L0J4_FRASN) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Franean1_5169 EMBL ABW14527.1
OrganismFrankia sp. (strain EAN1pec) [Complete proteome] [HAMAP] EMBL ABW14527.1
Taxonomic identifier298653 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeFrankiaceaeFrankia

Protein attributes

Sequence length408 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
A8L0J4 [UniParc].

Last modified December 4, 2007. Version 1.
Checksum: 74858770E993E506

FASTA40845,000
        10         20         30         40         50         60 
MREDRRVDLP VTPPVKPMLA RAAPQIPPDM LYEPKWDGFR ALVFRDGAEL EITSRNTRPM 

        70         80         90        100        110        120 
TRYFPELVEV LLAALPDRCV LDGEIVVVGP NGLDFEELSQ RVHPATSRVA KLALETPVSF 

       130        140        150        160        170        180 
VAFDLLALGD EAFTDQPFAR RRAVLEEVLA GHAGPAAPGT APARRIPSGV YLTPSTGELD 

       190        200        210        220        230        240 
MARQWFELYE GAGLDGLVAK PPDGAYQPDK RAMFKIKHDR TADCVVAGYR PHKNDPEAVG 

       250        260        270        280        290        300 
SLLLGLYADP ADEADPENAT DPARESPLLS VGVTSAFPMA RRRELVRELA HLVVPIDSHP 

       310        320        330        340        350        360 
WARQGPENAA QPGGDAGEEP AAAAGQPART PWDVGESRWA RGRDLSFVPL RPELVVEVRY 

       370        380        390        400 
DHMEGPRFRH TTQFVRFRPD RDPGGCTYAQ LERPVRFDIA DVLRIPPD 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000820 Genomic DNA. Translation: ABW14527.1.
RefSeqYP_001509433.1. NC_009921.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING298653.Franean1_5169.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABW14527; ABW14527; Franean1_5169.
GeneID5673503.
KEGGfre:Franean1_5169.
PATRIC21943638. VBIFraSp51419_5425.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000222508.
KOK01971.
OMAHERTADC.
OrthoDBEOG63NMFT.

Enzyme and pathway databases

BioCycFSP298653:GHPI-5189-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 2 hits.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA8L0J4_FRASN
AccessionPrimary (citable) accession number: A8L0J4
Entry history
Integrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: May 14, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)