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A8L0J4

- A8L0J4_FRASN

UniProt

A8L0J4 - A8L0J4_FRASN

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Franean1_5169

Organism
Frankia sp. (strain EAN1pec)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 38 (01 Oct 2014)
      Sequence version 1 (04 Dec 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciFSP298653:GHPI-5189-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Franean1_5169Imported
    OrganismiFrankia sp. (strain EAN1pec)Imported
    Taxonomic identifieri298653 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeFrankiaceaeFrankia
    ProteomesiUP000001313: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi298653.Franean1_5169.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000222508.
    KOiK01971.
    OMAiHERTADC.
    OrthoDBiEOG63NMFT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 2 hits.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A8L0J4-1 [UniParc]FASTAAdd to Basket

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    MREDRRVDLP VTPPVKPMLA RAAPQIPPDM LYEPKWDGFR ALVFRDGAEL    50
    EITSRNTRPM TRYFPELVEV LLAALPDRCV LDGEIVVVGP NGLDFEELSQ 100
    RVHPATSRVA KLALETPVSF VAFDLLALGD EAFTDQPFAR RRAVLEEVLA 150
    GHAGPAAPGT APARRIPSGV YLTPSTGELD MARQWFELYE GAGLDGLVAK 200
    PPDGAYQPDK RAMFKIKHDR TADCVVAGYR PHKNDPEAVG SLLLGLYADP 250
    ADEADPENAT DPARESPLLS VGVTSAFPMA RRRELVRELA HLVVPIDSHP 300
    WARQGPENAA QPGGDAGEEP AAAAGQPART PWDVGESRWA RGRDLSFVPL 350
    RPELVVEVRY DHMEGPRFRH TTQFVRFRPD RDPGGCTYAQ LERPVRFDIA 400
    DVLRIPPD 408
    Length:408
    Mass (Da):45,000
    Last modified:December 4, 2007 - v1
    Checksum:i74858770E993E506
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000820 Genomic DNA. Translation: ABW14527.1.
    RefSeqiWP_020462641.1. NC_009921.1.
    YP_001509433.1. NC_009921.1.

    Genome annotation databases

    EnsemblBacteriaiABW14527; ABW14527; Franean1_5169.
    GeneIDi5673503.
    KEGGifre:Franean1_5169.
    PATRICi21943638. VBIFraSp51419_5425.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000820 Genomic DNA. Translation: ABW14527.1 .
    RefSeqi WP_020462641.1. NC_009921.1.
    YP_001509433.1. NC_009921.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 298653.Franean1_5169.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABW14527 ; ABW14527 ; Franean1_5169 .
    GeneIDi 5673503.
    KEGGi fre:Franean1_5169.
    PATRICi 21943638. VBIFraSp51419_5425.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000222508.
    KOi K01971.
    OMAi HERTADC.
    OrthoDBi EOG63NMFT.

    Enzyme and pathway databases

    BioCyci FSP298653:GHPI-5189-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 2 hits.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: EAN1pecImported.

    Entry informationi

    Entry nameiA8L0J4_FRASN
    AccessioniPrimary (citable) accession number: A8L0J4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 4, 2007
    Last sequence update: December 4, 2007
    Last modified: October 1, 2014
    This is version 38 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3