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Protein

Autophagy-related protein 13

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

AutophagyUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Autophagy-related protein 13UniRule annotation
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA165543187.

Expressioni

Gene expression databases

GenevisibleiA8K0S6. HS.

Family & Domainsi

Sequence similaritiesi

Belongs to the ATG13 metazoan family.UniRule annotation

Phylogenomic databases

HOVERGENiHBG057592.
KOiK08331.

Family and domain databases

InterProiIPR018731. Autophagy-rel_p13.
[Graphical view]
PfamiPF10033. ATG13. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A8K0S6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
METDLNSQDR KDLDKFIKFF ALKTVQVIVQ ARLGEKICTR SSSSPTGSDW
60 70 80 90 100
FNLAIKDIPE VTHEAKKALA GQLPAVGRSM CVEISLKTSE GDSMELEIWC
110 120 130 140 150
LEMNEKCDKE IKVSYTVYNR LSLLLKSLLA ITRVTPAYRL PRKQGHEYVI
160 170 180 190 200
LYRIYFGEVQ LSGLGEGFQT VRVGTVGTPV GTITLSCAYR INLAFMSTRQ
210 220 230 240 250
FERTPPIMGI IIDHFVDRPY PSSSPMHPCN YRTAGEDTGV IYPSVEDSQE
260 270 280 290 300
VCTTSFSTSP PSQLSSSRLS YQPAALGVGS ADLAYPVVFA AGLNATHPHQ
310 320 330 340 350
LMVPGKEGGV PLAPNQPVHG TQADQERLAT CTPSDRTHCA ATPSSSEDTE
360 370 380 390 400
TVSNSSEGRA SPHDVLETIF VRKVGAFVNK PINQVTLTSL DIPFAMFAPK
410 420 430 440 450
NLELEDTDPM VNPPDSPETE SPLQGSLHSD GSSGGSSGNT HDDFVMIDFK
460 470 480 490 500
PAFSKDDILP MDLGTFYREF QNPPQLSSLS IDIGAQSMAE DLDSLPEKLA
510
VHEKNVREFD AFVETLQ
Length:517
Mass (Da):56,582
Last modified:December 4, 2007 - v1
Checksum:i4D1B94485E6479B8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK289641 mRNA. Translation: BAF82330.1.
RefSeqiNP_001136145.1. NM_001142673.2.
UniGeneiHs.127403.

Genome annotation databases

GeneIDi9776.
KEGGihsa:9776.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK289641 mRNA. Translation: BAF82330.1.
RefSeqiNP_001136145.1. NM_001142673.2.
UniGeneiHs.127403.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

DNASUi9776.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi9776.
KEGGihsa:9776.

Organism-specific databases

CTDi9776.
PharmGKBiPA165543187.

Phylogenomic databases

HOVERGENiHBG057592.
KOiK08331.

Miscellaneous databases

GenomeRNAii9776.
NextBioi36806.

Gene expression databases

GenevisibleiA8K0S6. HS.

Family and domain databases

InterProiIPR018731. Autophagy-rel_p13.
[Graphical view]
PfamiPF10033. ATG13. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: AmygdalaImported.

Entry informationi

Entry nameiA8K0S6_HUMAN
AccessioniPrimary (citable) accession number: A8K0S6
Entry historyi
Integrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: July 22, 2015
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.