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A8JAX1

- A8JAX1_CHLRE

UniProt

A8JAX1 - A8JAX1_CHLRE

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Protein
Superoxide dismutase
Gene
MSD2, CHLREDRAFT_193511
Organism
Chlamydomonas reinhardtii (Chlamydomonas smithii)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

  1. copper ion binding Source: EnsemblPlants/Gramene
  2. superoxide dismutase activity Source: UniProtKB-EC

GO - Biological processi

  1. defense response to bacterium Source: EnsemblPlants/Gramene
  2. embryo development ending in seed dormancy Source: EnsemblPlants/Gramene
  3. floral organ abscission Source: EnsemblPlants/Gramene
  4. response to salt stress Source: EnsemblPlants/Gramene
  5. response to zinc ion Source: EnsemblPlants/Gramene
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:MSD2Imported
ORF Names:CHLREDRAFT_193511Imported
OrganismiChlamydomonas reinhardtii (Chlamydomonas smithii)
Taxonomic identifieri3055 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeChlorophytaChlorophyceaeChlamydomonadalesChlamydomonadaceaeChlamydomonas
ProteomesiUP000006906: Unassembled WGS sequence

PTM / Processingi

Proteomic databases

PRIDEiA8JAX1.
ProMEXiA8JAX1.

Interactioni

Protein-protein interaction databases

STRINGi3055.JGI193511.

Structurei

3D structure databases

ProteinModelPortaliA8JAX1.
SMRiA8JAX1. Positions 29-223.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0605.
KOiK04564.
OMAiLNHSIYW.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A8JAX1-1 [UniParc]FASTAAdd to Basket

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MLARVALGLA RDGQSAVPTM TRAMSSVKLP DLPYSYGALE PYISGQIMEL    50
HHSKHHATYV ANLNKALEQQ AEAEHKGDVA KLISLQSAIK FNGGGHVNHD 100
IFWTNLCPHK EWQPPSGDLK ALIEAQWKTL DNFTTTFSAQ TAAVQGSGWG 150
WLGYNKATHK LEVVTLPNQD PLSVTGLVPL LGIDVWEHAY YLQYKNVRPD 200
YLKAIWNIVN WQNVEQRLAA AKK 223
Length:223
Mass (Da):24,852
Last modified:December 4, 2007 - v1
Checksum:i1E0F0A1A29E7F1B1
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GQ413966 mRNA. Translation: ACV41091.1.
DS496151 Genomic DNA. Translation: EDO98932.1.
RefSeqiXP_001699077.1. XM_001699025.1.
UniGeneiCre.2383.

Genome annotation databases

EnsemblPlantsiEDO98932; EDO98932; CHLREDRAFT_193511.
GeneIDi5724629.
KEGGicre:CHLREDRAFT_193511.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GQ413966 mRNA. Translation: ACV41091.1 .
DS496151 Genomic DNA. Translation: EDO98932.1 .
RefSeqi XP_001699077.1. XM_001699025.1.
UniGenei Cre.2383.

3D structure databases

ProteinModelPortali A8JAX1.
SMRi A8JAX1. Positions 29-223.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 3055.JGI193511.

Proteomic databases

PRIDEi A8JAX1.
ProMEXi A8JAX1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi EDO98932 ; EDO98932 ; CHLREDRAFT_193511 .
GeneIDi 5724629.
KEGGi cre:CHLREDRAFT_193511.

Phylogenomic databases

eggNOGi COG0605.
KOi K04564.
OMAi LNHSIYW.

Family and domain databases

InterProi IPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view ]
PANTHERi PTHR11404. PTHR11404. 1 hit.
Pfami PF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view ]
PIRSFi PIRSF000349. SODismutase. 1 hit.
PRINTSi PR01703. MNSODISMTASE.
SUPFAMi SSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEi PS00088. SOD_MN. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The Chlamydomonas genome reveals the evolution of key animal and plant functions."
    Merchant S.S., Prochnik S.E., Vallon O., Harris E.H., Karpowicz S.J., Witman G.B., Terry A., Salamov A., Fritz-Laylin L.K., Marechal-Drouard L., Marshall W.F., Qu L.H., Nelson D.R., Sanderfoot A.A., Spalding M.H., Kapitonov V.V., Ren Q., Ferris P.
    , Lindquist E., Shapiro H., Lucas S.M., Grimwood J., Schmutz J., Cardol P., Cerutti H., Chanfreau G., Chen C.L., Cognat V., Croft M.T., Dent R., Dutcher S., Fernandez E., Fukuzawa H., Gonzalez-Ballester D., Gonzalez-Halphen D., Hallmann A., Hanikenne M., Hippler M., Inwood W., Jabbari K., Kalanon M., Kuras R., Lefebvre P.A., Lemaire S.D., Lobanov A.V., Lohr M., Manuell A., Meier I., Mets L., Mittag M., Mittelmeier T., Moroney J.V., Moseley J., Napoli C., Nedelcu A.M., Niyogi K., Novoselov S.V., Paulsen I.T., Pazour G.J., Purton S., Ral J.P., Riano-Pachon D.M., Riekhof W., Rymarquis L., Schroda M., Stern D., Umen J., Willows R., Wilson N., Zimmer S.L., Allmer J., Balk J., Bisova K., Chen C.J., Elias M., Gendler K., Hauser C., Lamb M.R., Ledford H., Long J.C., Minagawa J., Page M.D., Pan J., Pootakham W., Roje S., Rose A., Stahlberg E., Terauchi A.M., Yang P., Ball S., Bowler C., Dieckmann C.L., Gladyshev V.N., Green P., Jorgensen R., Mayfield S., Mueller-Roeber B., Rajamani S., Sayre R.T., Brokstein P., Dubchak I., Goodstein D., Hornick L., Huang Y.W., Jhaveri J., Luo Y., Martinez D., Ngau W.C., Otillar B., Poliakov A., Porter A., Szajkowski L., Werner G., Zhou K., Grigoriev I.V., Rokhsar D.S., Grossman A.R.
    Science 318:245-250(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CC-503 and CC-503 cw92 mt+Imported.
  2. Page D.
    Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: CC-1690 wild type mt+ 21grImported.
  3. "Fe Sparing and Fe Recycling Contribute to Increased Superoxide Dismutase Capacity in Iron-Starved Chlamydomonas reinhardtii."
    Page M.D., Allen M.D., Kropat J., Urzica E.I., Karpowicz S.J., Hsieh S.I., Loo J.A., Merchant S.S.
    Plant Cell 24:2649-2665(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: CC-1690 wild type mt+ 21grImported.

Entry informationi

Entry nameiA8JAX1_CHLRE
AccessioniPrimary (citable) accession number: A8JAX1
Entry historyi
Integrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: July 9, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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