Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Superoxide dismutase

Gene

MSD2

Organism
Chlamydomonas reinhardtii (Chlamydomonas smithii)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductaseUniRule annotation
LigandMetal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:MSD2Imported
ORF Names:CHLREDRAFT_193511Imported
OrganismiChlamydomonas reinhardtii (Chlamydomonas smithii)Imported
Taxonomic identifieri3055 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeChlorophytaChlorophyceaeChlamydomonadalesChlamydomonadaceaeChlamydomonas
Proteomesi
  • UP000006906 Componenti: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi3055.EDO98932.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini28 – 106Sod_Fe_NInterPro annotationAdd BLAST79
Domaini115 – 217Sod_Fe_CInterPro annotationAdd BLAST103

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

eggNOGiKOG0876. Eukaryota.
COG0605. LUCA.
KOiK04564.
OMAiVINFENA.

Family and domain databases

InterProiView protein in InterPro
IPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
PfamiView protein in Pfam
PF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiView protein in PROSITE
PS00088. SOD_MN. 1 hit.

Sequencei

Sequence statusi: Complete.

A8JAX1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLARVALGLA RDGQSAVPTM TRAMSSVKLP DLPYSYGALE PYISGQIMEL
60 70 80 90 100
HHSKHHATYV ANLNKALEQQ AEAEHKGDVA KLISLQSAIK FNGGGHVNHD
110 120 130 140 150
IFWTNLCPHK EWQPPSGDLK ALIEAQWKTL DNFTTTFSAQ TAAVQGSGWG
160 170 180 190 200
WLGYNKATHK LEVVTLPNQD PLSVTGLVPL LGIDVWEHAY YLQYKNVRPD
210 220
YLKAIWNIVN WQNVEQRLAA AKK
Length:223
Mass (Da):24,852
Last modified:December 4, 2007 - v1
Checksum:i1E0F0A1A29E7F1B1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GQ413966 mRNA. Translation: ACV41091.1.
DS496151 Genomic DNA. Translation: EDO98932.1.
RefSeqiXP_001699077.1. XM_001699025.1.
UniGeneiCre.2383.

Genome annotation databases

EnsemblPlantsiEDO98932; EDO98932; CHLREDRAFT_193511.
GeneIDi5724629.
GrameneiEDO98932; EDO98932; CHLREDRAFT_193511.
KEGGicre:CHLREDRAFT_193511.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GQ413966 mRNA. Translation: ACV41091.1.
DS496151 Genomic DNA. Translation: EDO98932.1.
RefSeqiXP_001699077.1. XM_001699025.1.
UniGeneiCre.2383.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3055.EDO98932.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiEDO98932; EDO98932; CHLREDRAFT_193511.
GeneIDi5724629.
GrameneiEDO98932; EDO98932; CHLREDRAFT_193511.
KEGGicre:CHLREDRAFT_193511.

Phylogenomic databases

eggNOGiKOG0876. Eukaryota.
COG0605. LUCA.
KOiK04564.
OMAiVINFENA.

Family and domain databases

InterProiView protein in InterPro
IPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
PfamiView protein in Pfam
PF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiView protein in PROSITE
PS00088. SOD_MN. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiA8JAX1_CHLRE
AccessioniPrimary (citable) accession number: A8JAX1
Entry historyiIntegrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: May 10, 2017
This is version 70 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.