Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

A8JAX1

- A8JAX1_CHLRE

UniProt

A8JAX1 - A8JAX1_CHLRE

Protein

Superoxide dismutase

Gene

MSD2

Organism
Chlamydomonas reinhardtii (Chlamydomonas smithii)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 47 (01 Oct 2014)
      Sequence version 1 (04 Dec 2007)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

    Catalytic activityi

    2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

    GO - Molecular functioni

    1. copper ion binding Source: EnsemblPlants/Gramene
    2. superoxide dismutase activity Source: UniProtKB-EC

    GO - Biological processi

    1. defense response to bacterium Source: EnsemblPlants/Gramene
    2. embryo development ending in seed dormancy Source: EnsemblPlants/Gramene
    3. floral organ abscission Source: EnsemblPlants/Gramene
    4. response to salt stress Source: EnsemblPlants/Gramene
    5. response to zinc ion Source: EnsemblPlants/Gramene

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
    Gene namesi
    Name:MSD2Imported
    ORF Names:CHLREDRAFT_193511Imported
    OrganismiChlamydomonas reinhardtii (Chlamydomonas smithii)Imported
    Taxonomic identifieri3055 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeChlorophytaChlorophyceaeChlamydomonadalesChlamydomonadaceaeChlamydomonas
    ProteomesiUP000006906: Unassembled WGS sequence

    PTM / Processingi

    Proteomic databases

    PRIDEiA8JAX1.
    ProMEXiA8JAX1.

    Interactioni

    Protein-protein interaction databases

    STRINGi3055.JGI193511.

    Structurei

    3D structure databases

    ProteinModelPortaliA8JAX1.
    SMRiA8JAX1. Positions 29-223.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0605.
    KOiK04564.
    OMAiLNHSIYW.

    Family and domain databases

    InterProiIPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view]
    PANTHERiPTHR11404. PTHR11404. 1 hit.
    PfamiPF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000349. SODismutase. 1 hit.
    PRINTSiPR01703. MNSODISMTASE.
    SUPFAMiSSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEiPS00088. SOD_MN. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A8JAX1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLARVALGLA RDGQSAVPTM TRAMSSVKLP DLPYSYGALE PYISGQIMEL    50
    HHSKHHATYV ANLNKALEQQ AEAEHKGDVA KLISLQSAIK FNGGGHVNHD 100
    IFWTNLCPHK EWQPPSGDLK ALIEAQWKTL DNFTTTFSAQ TAAVQGSGWG 150
    WLGYNKATHK LEVVTLPNQD PLSVTGLVPL LGIDVWEHAY YLQYKNVRPD 200
    YLKAIWNIVN WQNVEQRLAA AKK 223
    Length:223
    Mass (Da):24,852
    Last modified:December 4, 2007 - v1
    Checksum:i1E0F0A1A29E7F1B1
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GQ413966 mRNA. Translation: ACV41091.1.
    DS496151 Genomic DNA. Translation: EDO98932.1.
    RefSeqiXP_001699077.1. XM_001699025.1.
    UniGeneiCre.2383.

    Genome annotation databases

    EnsemblPlantsiEDO98932; EDO98932; CHLREDRAFT_193511.
    GeneIDi5724629.
    KEGGicre:CHLREDRAFT_193511.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GQ413966 mRNA. Translation: ACV41091.1 .
    DS496151 Genomic DNA. Translation: EDO98932.1 .
    RefSeqi XP_001699077.1. XM_001699025.1.
    UniGenei Cre.2383.

    3D structure databases

    ProteinModelPortali A8JAX1.
    SMRi A8JAX1. Positions 29-223.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 3055.JGI193511.

    Proteomic databases

    PRIDEi A8JAX1.
    ProMEXi A8JAX1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi EDO98932 ; EDO98932 ; CHLREDRAFT_193511 .
    GeneIDi 5724629.
    KEGGi cre:CHLREDRAFT_193511.

    Phylogenomic databases

    eggNOGi COG0605.
    KOi K04564.
    OMAi LNHSIYW.

    Family and domain databases

    InterProi IPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view ]
    PANTHERi PTHR11404. PTHR11404. 1 hit.
    Pfami PF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000349. SODismutase. 1 hit.
    PRINTSi PR01703. MNSODISMTASE.
    SUPFAMi SSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEi PS00088. SOD_MN. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The Chlamydomonas genome reveals the evolution of key animal and plant functions."
      Merchant S.S., Prochnik S.E., Vallon O., Harris E.H., Karpowicz S.J., Witman G.B., Terry A., Salamov A., Fritz-Laylin L.K., Marechal-Drouard L., Marshall W.F., Qu L.H., Nelson D.R., Sanderfoot A.A., Spalding M.H., Kapitonov V.V., Ren Q., Ferris P.
      , Lindquist E., Shapiro H., Lucas S.M., Grimwood J., Schmutz J., Cardol P., Cerutti H., Chanfreau G., Chen C.L., Cognat V., Croft M.T., Dent R., Dutcher S., Fernandez E., Fukuzawa H., Gonzalez-Ballester D., Gonzalez-Halphen D., Hallmann A., Hanikenne M., Hippler M., Inwood W., Jabbari K., Kalanon M., Kuras R., Lefebvre P.A., Lemaire S.D., Lobanov A.V., Lohr M., Manuell A., Meier I., Mets L., Mittag M., Mittelmeier T., Moroney J.V., Moseley J., Napoli C., Nedelcu A.M., Niyogi K., Novoselov S.V., Paulsen I.T., Pazour G.J., Purton S., Ral J.P., Riano-Pachon D.M., Riekhof W., Rymarquis L., Schroda M., Stern D., Umen J., Willows R., Wilson N., Zimmer S.L., Allmer J., Balk J., Bisova K., Chen C.J., Elias M., Gendler K., Hauser C., Lamb M.R., Ledford H., Long J.C., Minagawa J., Page M.D., Pan J., Pootakham W., Roje S., Rose A., Stahlberg E., Terauchi A.M., Yang P., Ball S., Bowler C., Dieckmann C.L., Gladyshev V.N., Green P., Jorgensen R., Mayfield S., Mueller-Roeber B., Rajamani S., Sayre R.T., Brokstein P., Dubchak I., Goodstein D., Hornick L., Huang Y.W., Jhaveri J., Luo Y., Martinez D., Ngau W.C., Otillar B., Poliakov A., Porter A., Szajkowski L., Werner G., Zhou K., Grigoriev I.V., Rokhsar D.S., Grossman A.R.
      Science 318:245-250(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CC-503Imported and CC-503 cw92 mt+Imported.
    2. Page D.
      Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: CC-1690 wild type mt+ 21grImported.
    3. "Fe Sparing and Fe Recycling Contribute to Increased Superoxide Dismutase Capacity in Iron-Starved Chlamydomonas reinhardtii."
      Page M.D., Allen M.D., Kropat J., Urzica E.I., Karpowicz S.J., Hsieh S.I., Loo J.A., Merchant S.S.
      Plant Cell 24:2649-2665(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: CC-1690 wild type mt+ 21grImported.

    Entry informationi

    Entry nameiA8JAX1_CHLRE
    AccessioniPrimary (citable) accession number: A8JAX1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 4, 2007
    Last sequence update: December 4, 2007
    Last modified: October 1, 2014
    This is version 47 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3