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Protein
Submitted name:

Centriole proteome protein

Gene

POC16

Organism
Chlamydomonas reinhardtii (Chlamydomonas smithii)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Centriole proteome proteinImported
Gene namesi
Name:POC16Imported
ORF Names:CHLRE_14g613400v5Imported, CHLREDRAFT_18900Imported
OrganismiChlamydomonas reinhardtii (Chlamydomonas smithii)Imported
Taxonomic identifieri3055 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeChlorophytaChlorophyceaeChlamydomonadalesChlamydomonadaceaeChlamydomonas
Proteomesi
  • UP000006906 Componenti: Unassembled WGS sequence

PTM / Processingi

Proteomic databases

PaxDbiA8JAN3.

Interactioni

Protein-protein interaction databases

STRINGi3055.EDO99093.

Structurei

3D structure databases

ProteinModelPortaliA8JAN3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini726 – 895WD_REPEATS_REGIONInterPro annotationAdd BLAST170
Repeati768 – 809WDPROSITE-ProRule annotationAdd BLAST42
Repeati854 – 886WDPROSITE-ProRule annotationAdd BLAST33
Domaini1783 – 1824WD_REPEATS_REGIONInterPro annotationAdd BLAST42
Repeati1783 – 1824WDPROSITE-ProRule annotationAdd BLAST42

Keywords - Domaini

RepeatSAAS annotation, WD repeatPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG0266. Eukaryota.
KOG3213. Eukaryota.
ENOG410XNWN. LUCA.
InParanoidiA8JAN3.
OMAiRWTCLQL.

Family and domain databases

Gene3Di2.130.10.10. 6 hits.
InterProiView protein in InterPro
IPR007714. CFA20/WDR90/C3orf67.
IPR011047. Quinoprotein_ADH-like_supfam.
IPR015943. WD40/YVTN_repeat-like_dom_sf.
IPR001680. WD40_repeat.
IPR017986. WD40_repeat_dom.
IPR036322. WD40_repeat_dom_sf.
IPR030466. WDR90.
PANTHERiPTHR13720:SF24. PTHR13720:SF24. 1 hit.
PfamiView protein in Pfam
PF05018. DUF667. 1 hit.
PF00400. WD40. 4 hits.
SMARTiView protein in SMART
SM00320. WD40. 16 hits.
SUPFAMiSSF50978. SSF50978. 3 hits.
SSF50998. SSF50998. 7 hits.
PROSITEiView protein in PROSITE
PS50082. WD_REPEATS_2. 3 hits.
PS50294. WD_REPEATS_REGION. 2 hits.

Sequencei

Sequence statusi: Complete.

A8JAN3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLAPEWQHP FVNIFKLCDV DTMREFETKG DVTEHIDKII GKKVFKIRGM
60 70 80 90 100
IPAGNYLRVP RTKLQTLGLT GRLLYIQLKV TPIKVFAIHI EVVTEDHNIH
110 120 130 140 150
RISISNMYNP ESMKRKSNGV QLPFPKPSHR WCVLAVDLRE ALRGYTSSPF
160 170 180 190 200
ASVKAVQTCS WMTVRTMFAS DYKFSLQSLP GDMALSHALD SSLFEMVWLP
210 220 230 240 250
AEPQDAPTMD FMPPPKRYGT RARRPGTAET ADTAGAAGRK SLSGASAGGA
260 270 280 290 300
GPAKGGAKAG AAAGGKRAVS SAGATRGTPS QRGSTAGAAT PGSGAGGGGH
310 320 330 340 350
DGEEDFEDDL SEDLDNGAPL PPSPAVPPPL SPSVAARIAG RATSANIGAA
360 370 380 390 400
TAAGAIVGAA AAHPRPGESD ASARPFPRPT TALLAGAATT ASLRPPIASA
410 420 430 440 450
NVAKPEPGQP AAQPLLPDPA LTLTRVNAYS GEFVRCLAWL PGTDEVVFAA
460 470 480 490 500
ASVVVIMGVA DPGAAAQQQA AVTPGRQRYC LGHTAFVCAL AVASDGRLLA
510 520 530 540 550
SCQEGKEAIV RLWDTANCAC LAILNAHASG LSCVDLSPDL RALAAVGLDV
560 570 580 590 600
QGRQTIALWN IAELRAAGGP KVELVTRHAT EYNIKVLKFS AYQEDHLLTA
610 620 630 640 650
GRDSIRIYRL KAGQLRGTSV RLVPQDKRVT SFAGGVSAAV GPNIFTDIGF
660 670 680 690 700
EAGVGVYGVD AFKVYVSSAS GALFVVDYTT RQLDAIFQLH AAAINCLVVS
710 720 730 740 750
DGLVLTGGDD RLLRAWPLDF RDYLLEAEHE GAVTGLAMST DALRLAVGTE
760 770 780 790 800
NGTLGVLAIP THAYTTLLRS HCGAVNAVAV DPNRDQYCTV SSDGTLRIWH
810 820 830 840 850
LATHQQLYEF DAPGEAVSAI AYHPHPSHHE LAAGFANGRL RVFDVPSTTL
860 870 880 890 900
LQEHHQHRAG ITELLFSPGG DRLFSGGADG ALVVYDTARM YAPAQYLSAG
910 920 930 940 950
VRDIKVCCAV SSNGAFFASL VRDPYRRTTS LLVFHGRTLD PFMRIETDAA
960 970 980 990 1000
AYVKLAFSAD CNELWALTSG RRLDRYELKD GQLVQQIHEV SPLELTALCL
1010 1020 1030 1040 1050
DPAGRYAATA GADGLLRLWG CVPLPALRGL KGLPPNSAFL GHPSAILGAA
1060 1070 1080 1090 1100
FHRSGYLVTV GDADCVCVWR VNADHMQQER GHLAAAAHAL RGAAAGGGAA
1110 1120 1130 1140 1150
GASPLLLQGA AHHTQATGAL DPTDPRSRAH PSTALGPVAS ARDHQLTTRA
1160 1170 1180 1190 1200
AALGTPLPAG VLGLVPAPSA FTGTYTQGMA APSLGSTVAS PTRVTAATAN
1210 1220 1230 1240 1250
SMAALSLVAN SPAVAATAPG LPSHALVVPK PSPPPPSAAP ASPGRSPNRA
1260 1270 1280 1290 1300
LAGAGPARSR LPVPLPPSPQ PLPPPPPPRC SWLLGYSPTG SSNVAWNATT
1310 1320 1330 1340 1350
GLFCYVVEDM VVMEKLATRQ QRYLRGHNRP LSCLAASPDG ALVAAGPAAA
1360 1370 1380 1390 1400
EPAFTEPAAG ARAAQLQQQG VAVGPGGASP TAPFADVVVW EAASGRELWR
1410 1420 1430 1440 1450
LRYHPLGVQA LAFSPDGRWL VSLGRDPERG VVVWDVAAGL LVAAGRTEQS
1460 1470 1480 1490 1500
PRAAAWLWGG HNPAFATAGA DGLLLWTLQD NFLEQRTVPL SPTASPRDPR
1510 1520 1530 1540 1550
PVTALAVDPH GALLAAEAPA APGSQVPVWQ VQVELQPPQE PGGEAAVAPG
1560 1570 1580 1590 1600
GGGGMSAAVV QVAALPSGCV VTAMAAGLDF ALLATDGGSV VRYRRSTLSG
1610 1620 1630 1640 1650
TWLESSAVRL DGRVAALSAE PNMCDAVAAT DTATIWFVGM QDASCVPIVC
1660 1670 1680 1690 1700
GQAAPVTGLV PAPHSGRVMA STAADGLLRV WRLGPEDAEP ALELHSTSPA
1710 1720 1730 1740 1750
TAAAFLLRQP TDAPAHTLRH PPSAAPSSAA SSSPLDPLDP LPAADAAPAR
1760 1770 1780 1790 1800
PVLLPAPHLL GGYGDGSLRL FALEPAVQLS WALARHPAPV VGVAPHPRRG
1810 1820 1830 1840 1850
LVLSASSDGS LAVTDLSSTR LVSYITAFTA AGPTPHSPGG TGRRSPRGAA
1860 1870 1880 1890 1900
SPPPAPPRPG TGPLQAMAVS SGPGAPLAAL AWRDRLVVFA APWDDPACSP
1910 1920 1930 1940 1950
LAEYDVTPSD GRTDAADSHG LLSPDVPACL AFVNSSSGSS SSGTSAASPG
1960 1970 1980 1990 2000
LSAHLGGSSS GAPSSKLLAY ASPLLPGTVL LYDVRLAAVA RRVRLPQMVR
2010 2020 2030 2040 2050
SLAVAPDGGA MVVGCMGRSV FLVHLASGNT EELGGHAGAV AAASYTGDGG
2060 2070 2080
HAVTASGSVL MVWDAAQLLK GVTPPPPRML REF
Length:2,083
Mass (Da):214,904
Last modified:December 4, 2007 - v1
Checksum:i4BCCB4FDF6ABA400
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS496150 Genomic DNA. Translation: EDO99093.1.
CM008975 Genomic DNA. Translation: PNW72962.1.
RefSeqiXP_001699039.1. XM_001698987.1.

Genome annotation databases

EnsemblPlantsiEDO99093; EDO99093; CHLREDRAFT_18900.
GeneIDi5724591.
GrameneiEDO99093; EDO99093; CHLREDRAFT_18900.
KEGGicre:CHLREDRAFT_18900.

Entry informationi

Entry nameiA8JAN3_CHLRE
AccessioniPrimary (citable) accession number: A8JAN3
Entry historyiIntegrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: March 28, 2018
This is version 59 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported