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A8J3G7

- A8J3G7_CHLRE

UniProt

A8J3G7 - A8J3G7_CHLRE

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Protein
Submitted name:

Histone deacetylase

Gene
CHLREDRAFT_137868
Organism
Chlamydomonas reinhardtii (Chlamydomonas smithii)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. NAD-dependent histone deacetylase activity (H3-K14 specific) Source: UniProtKB-EC
  2. NAD-dependent histone deacetylase activity (H3-K18 specific) Source: UniProtKB-EC
  3. NAD-dependent histone deacetylase activity (H3-K9 specific) Source: UniProtKB-EC
  4. NAD-dependent histone deacetylase activity (H4-K16 specific) Source: UniProtKB-EC

GO - Biological processi

  1. regulation of transcription, DNA-templated Source: UniProtKB-KW
  2. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Histone deacetylaseImported
Gene namesi
ORF Names:CHLREDRAFT_137868Imported
OrganismiChlamydomonas reinhardtii (Chlamydomonas smithii)
Taxonomic identifieri3055 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeChlorophytaChlorophyceaeChlamydomonadalesChlamydomonadaceaeChlamydomonas
ProteomesiUP000006906: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

  1. nucleus Source: UniProtKB-SubCell
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi3055.JGI137868.

Structurei

3D structure databases

ProteinModelPortaliA8J3G7.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0123.
KOiK06067.

Family and domain databases

Gene3Di3.40.800.20. 1 hit.
InterProiIPR000286. His_deacetylse.
IPR003084. His_deacetylse_1.
IPR023801. His_deacetylse_dom.
[Graphical view]
PANTHERiPTHR10625. PTHR10625. 1 hit.
PfamiPF00850. Hist_deacetyl. 1 hit.
[Graphical view]
PIRSFiPIRSF037913. His_deacetylse_1. 1 hit.
PRINTSiPR01270. HDASUPER.
PR01271. HISDACETLASE.

Sequencei

Sequence statusi: Fragment.

A8J3G7-1 [UniParc]FASTAAdd to Basket

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MTGARKNKVA YFYDREFQEF YFGQNHPMKP HRLAMTHHLV LGYGLHKKMD    50
VFRPRRAHPA ELAQFHTEDY IEFLSKVTPD SAAKFGNQLR QYNINDDCPI 100
FDNMFKFCQL YAGASIEGAV KLNHNLCDIA INWSGGLHHA KKGEASGFCY 150
INDLVLAILE LLKYHARVLY IDIDVHHGDG VEEAFYLSDR VMTVSFHKYG 200
DYFFPGTGDL MDTGELNGKY YSVNVPLKDG TNDDTFHALF KPIMRRVMEV 250
FRPEAIVMQC GADSLAHDRL GCFNMSLRGH GEAIRFMKEF GLPMLITGGG 300
GYTKHNVARC WTYETAILTD TQVPEQLPRS DYHEYFAPDF SLNVSAHKVM 350
DDSNSKAEVQ RILREVFENL RLLEHAPGVH MHQVPPDFRV PRYNYDEEPL 400
EERVGKYARE HLIIREDE 418
Length:418
Mass (Da):48,173
Last modified:December 4, 2007 - v1
Checksum:iDF8D21E846C68F54
GO

Non-terminal residue

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei418 – 4181Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS496135 Genomic DNA. Translation: EDP01149.1.
RefSeqiXP_001695812.1. XM_001695760.1.

Genome annotation databases

EnsemblPlantsiEDP01149; EDP01149; CHLREDRAFT_137868.
GeneIDi5721417.
KEGGicre:CHLREDRAFT_137868.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS496135 Genomic DNA. Translation: EDP01149.1 .
RefSeqi XP_001695812.1. XM_001695760.1.

3D structure databases

ProteinModelPortali A8J3G7.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 3055.JGI137868.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi EDP01149 ; EDP01149 ; CHLREDRAFT_137868 .
GeneIDi 5721417.
KEGGi cre:CHLREDRAFT_137868.

Phylogenomic databases

eggNOGi COG0123.
KOi K06067.

Family and domain databases

Gene3Di 3.40.800.20. 1 hit.
InterProi IPR000286. His_deacetylse.
IPR003084. His_deacetylse_1.
IPR023801. His_deacetylse_dom.
[Graphical view ]
PANTHERi PTHR10625. PTHR10625. 1 hit.
Pfami PF00850. Hist_deacetyl. 1 hit.
[Graphical view ]
PIRSFi PIRSF037913. His_deacetylse_1. 1 hit.
PRINTSi PR01270. HDASUPER.
PR01271. HISDACETLASE.
ProtoNeti Search...

Publicationsi

  1. "The Chlamydomonas genome reveals the evolution of key animal and plant functions."
    Merchant S.S., Prochnik S.E., Vallon O., Harris E.H., Karpowicz S.J., Witman G.B., Terry A., Salamov A., Fritz-Laylin L.K., Marechal-Drouard L., Marshall W.F., Qu L.H., Nelson D.R., Sanderfoot A.A., Spalding M.H., Kapitonov V.V., Ren Q., Ferris P.
    , Lindquist E., Shapiro H., Lucas S.M., Grimwood J., Schmutz J., Cardol P., Cerutti H., Chanfreau G., Chen C.L., Cognat V., Croft M.T., Dent R., Dutcher S., Fernandez E., Fukuzawa H., Gonzalez-Ballester D., Gonzalez-Halphen D., Hallmann A., Hanikenne M., Hippler M., Inwood W., Jabbari K., Kalanon M., Kuras R., Lefebvre P.A., Lemaire S.D., Lobanov A.V., Lohr M., Manuell A., Meier I., Mets L., Mittag M., Mittelmeier T., Moroney J.V., Moseley J., Napoli C., Nedelcu A.M., Niyogi K., Novoselov S.V., Paulsen I.T., Pazour G.J., Purton S., Ral J.P., Riano-Pachon D.M., Riekhof W., Rymarquis L., Schroda M., Stern D., Umen J., Willows R., Wilson N., Zimmer S.L., Allmer J., Balk J., Bisova K., Chen C.J., Elias M., Gendler K., Hauser C., Lamb M.R., Ledford H., Long J.C., Minagawa J., Page M.D., Pan J., Pootakham W., Roje S., Rose A., Stahlberg E., Terauchi A.M., Yang P., Ball S., Bowler C., Dieckmann C.L., Gladyshev V.N., Green P., Jorgensen R., Mayfield S., Mueller-Roeber B., Rajamani S., Sayre R.T., Brokstein P., Dubchak I., Goodstein D., Hornick L., Huang Y.W., Jhaveri J., Luo Y., Martinez D., Ngau W.C., Otillar B., Poliakov A., Porter A., Szajkowski L., Werner G., Zhou K., Grigoriev I.V., Rokhsar D.S., Grossman A.R.
    Science 318:245-250(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CC-503.

Entry informationi

Entry nameiA8J3G7_CHLRE
AccessioniPrimary (citable) accession number: A8J3G7
Entry historyi
Integrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: July 9, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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