Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

A8J3G7

- A8J3G7_CHLRE

UniProt

A8J3G7 - A8J3G7_CHLRE

Protein
Submitted name:

Histone deacetylase

Gene

CHLREDRAFT_137868

Organism
Chlamydomonas reinhardtii (Chlamydomonas smithii)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 35 (01 Oct 2014)
      Sequence version 1 (04 Dec 2007)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. histone deacetylase activity Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Histone deacetylaseImported
    Gene namesi
    ORF Names:CHLREDRAFT_137868Imported
    OrganismiChlamydomonas reinhardtii (Chlamydomonas smithii)Imported
    Taxonomic identifieri3055 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeChlorophytaChlorophyceaeChlamydomonadalesChlamydomonadaceaeChlamydomonas
    ProteomesiUP000006906: Unassembled WGS sequence

    Interactioni

    Protein-protein interaction databases

    STRINGi3055.JGI137868.

    Structurei

    3D structure databases

    ProteinModelPortaliA8J3G7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG0123.
    KOiK06067.

    Family and domain databases

    Gene3Di3.40.800.20. 1 hit.
    InterProiIPR000286. His_deacetylse.
    IPR003084. His_deacetylse_1.
    IPR023801. His_deacetylse_dom.
    [Graphical view]
    PANTHERiPTHR10625. PTHR10625. 1 hit.
    PfamiPF00850. Hist_deacetyl. 1 hit.
    [Graphical view]
    PIRSFiPIRSF037913. His_deacetylse_1. 1 hit.
    PRINTSiPR01270. HDASUPER.
    PR01271. HISDACETLASE.

    Sequencei

    Sequence statusi: Fragment.

    A8J3G7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTGARKNKVA YFYDREFQEF YFGQNHPMKP HRLAMTHHLV LGYGLHKKMD    50
    VFRPRRAHPA ELAQFHTEDY IEFLSKVTPD SAAKFGNQLR QYNINDDCPI 100
    FDNMFKFCQL YAGASIEGAV KLNHNLCDIA INWSGGLHHA KKGEASGFCY 150
    INDLVLAILE LLKYHARVLY IDIDVHHGDG VEEAFYLSDR VMTVSFHKYG 200
    DYFFPGTGDL MDTGELNGKY YSVNVPLKDG TNDDTFHALF KPIMRRVMEV 250
    FRPEAIVMQC GADSLAHDRL GCFNMSLRGH GEAIRFMKEF GLPMLITGGG 300
    GYTKHNVARC WTYETAILTD TQVPEQLPRS DYHEYFAPDF SLNVSAHKVM 350
    DDSNSKAEVQ RILREVFENL RLLEHAPGVH MHQVPPDFRV PRYNYDEEPL 400
    EERVGKYARE HLIIREDE 418
    Length:418
    Mass (Da):48,173
    Last modified:December 4, 2007 - v1
    Checksum:iDF8D21E846C68F54
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei418 – 4181Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DS496135 Genomic DNA. Translation: EDP01149.1.
    RefSeqiXP_001695812.1. XM_001695760.1.

    Genome annotation databases

    EnsemblPlantsiEDP01149; EDP01149; CHLREDRAFT_137868.
    GeneIDi5721417.
    KEGGicre:CHLREDRAFT_137868.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DS496135 Genomic DNA. Translation: EDP01149.1 .
    RefSeqi XP_001695812.1. XM_001695760.1.

    3D structure databases

    ProteinModelPortali A8J3G7.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 3055.JGI137868.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi EDP01149 ; EDP01149 ; CHLREDRAFT_137868 .
    GeneIDi 5721417.
    KEGGi cre:CHLREDRAFT_137868.

    Phylogenomic databases

    eggNOGi COG0123.
    KOi K06067.

    Family and domain databases

    Gene3Di 3.40.800.20. 1 hit.
    InterProi IPR000286. His_deacetylse.
    IPR003084. His_deacetylse_1.
    IPR023801. His_deacetylse_dom.
    [Graphical view ]
    PANTHERi PTHR10625. PTHR10625. 1 hit.
    Pfami PF00850. Hist_deacetyl. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF037913. His_deacetylse_1. 1 hit.
    PRINTSi PR01270. HDASUPER.
    PR01271. HISDACETLASE.
    ProtoNeti Search...

    Publicationsi

    1. "The Chlamydomonas genome reveals the evolution of key animal and plant functions."
      Merchant S.S., Prochnik S.E., Vallon O., Harris E.H., Karpowicz S.J., Witman G.B., Terry A., Salamov A., Fritz-Laylin L.K., Marechal-Drouard L., Marshall W.F., Qu L.H., Nelson D.R., Sanderfoot A.A., Spalding M.H., Kapitonov V.V., Ren Q., Ferris P.
      , Lindquist E., Shapiro H., Lucas S.M., Grimwood J., Schmutz J., Cardol P., Cerutti H., Chanfreau G., Chen C.L., Cognat V., Croft M.T., Dent R., Dutcher S., Fernandez E., Fukuzawa H., Gonzalez-Ballester D., Gonzalez-Halphen D., Hallmann A., Hanikenne M., Hippler M., Inwood W., Jabbari K., Kalanon M., Kuras R., Lefebvre P.A., Lemaire S.D., Lobanov A.V., Lohr M., Manuell A., Meier I., Mets L., Mittag M., Mittelmeier T., Moroney J.V., Moseley J., Napoli C., Nedelcu A.M., Niyogi K., Novoselov S.V., Paulsen I.T., Pazour G.J., Purton S., Ral J.P., Riano-Pachon D.M., Riekhof W., Rymarquis L., Schroda M., Stern D., Umen J., Willows R., Wilson N., Zimmer S.L., Allmer J., Balk J., Bisova K., Chen C.J., Elias M., Gendler K., Hauser C., Lamb M.R., Ledford H., Long J.C., Minagawa J., Page M.D., Pan J., Pootakham W., Roje S., Rose A., Stahlberg E., Terauchi A.M., Yang P., Ball S., Bowler C., Dieckmann C.L., Gladyshev V.N., Green P., Jorgensen R., Mayfield S., Mueller-Roeber B., Rajamani S., Sayre R.T., Brokstein P., Dubchak I., Goodstein D., Hornick L., Huang Y.W., Jhaveri J., Luo Y., Martinez D., Ngau W.C., Otillar B., Poliakov A., Porter A., Szajkowski L., Werner G., Zhou K., Grigoriev I.V., Rokhsar D.S., Grossman A.R.
      Science 318:245-250(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CC-503Imported.

    Entry informationi

    Entry nameiA8J3G7_CHLRE
    AccessioniPrimary (citable) accession number: A8J3G7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 4, 2007
    Last sequence update: December 4, 2007
    Last modified: October 1, 2014
    This is version 35 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3