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A8IK84 (A8IK84_AZOC5) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Argininosuccinate lyase 1 HAMAP MF_00006
Short name=ASAL 1 HAMAP MF_00006
EC=4.3.2.1 HAMAP MF_00006
Alternative name(s):
Arginosuccinase 1 HAMAP MF_00006
Gene names
Name:argH1 HAMAP MF_00006
Ordered Locus Names:AZC_3873
OrganismAzorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) [Complete proteome] [HAMAP] EMBL BAF89871.1
Taxonomic identifier438753 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Xanthobacteraceae › Azorhizobium

Protein attributes

Sequence length504 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

2-(N(omega)-L-arginino)succinate = fumarate + L-arginine. HAMAP MF_00006

Pathway

Amino-acid biosynthesis; L-arginine biosynthesis; L-arginine from L-ornithine and carbamoyl phosphate: step 3/3. HAMAP MF_00006

Subcellular location

Cytoplasm By similarity HAMAP MF_00006.

Sequence similarities

Belongs to the lyase 1 family. Argininosuccinate lyase subfamily. HAMAP MF_00006

Ontologies

Keywords
   Biological processAmino-acid biosynthesis
Arginine biosynthesis HAMAP MF_00006
   Cellular componentCytoplasm HAMAP MF_00006
   Molecular functionLyase HAMAP MF_00006 EMBL BAF89871.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processarginine biosynthetic process via ornithine

Inferred from electronic annotation. Source: InterPro

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionargininosuccinate lyase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A8IK84 [UniParc].

Last modified December 4, 2007. Version 1.
Checksum: 26ABCF6957204BF3

FASTA50455,724
        10         20         30         40         50         60 
MMIESEAHRS KVSRRLQDET AQEICDFIYL PRLADFARGF PYLTAINQAH ILMLDAQALI 

        70         80         90        100        110        120 
PSDAAKTLAE ALLQMEENGP SAIALDPQRE DAYFNYEAHL IGKVGLDIGG RAHTARSRND 

       130        140        150        160        170        180 
ILATMDRMRC RDLVIALLDA LAELRQTAAE QAARYVDVVM PGYTHLQPAQ PMTYGFYLAG 

       190        200        210        220        230        240 
VAEALERDAE RLAGAYGRVD RCPLGAGAFA GTPYGIDRSE TARLLGFPAV VDSTLDAVAS 

       250        260        270        280        290        300 
RDFIFEVLGS LSILAATWSR IAQDYFLWST DEFRFIEFPD SVAGTSSIMP QKKNPIVLEF 

       310        320        330        340        350        360 
LKGKAGHIIG HYAGAVSILR ATNFTHSGDA NRESISFFWG AADDCLTSLK LLRLIIRTAS 

       370        380        390        400        410        420 
PRREVMLKRA RENFSSATDL ADAIVMKSGL SFRQAHHIVG AVVRDALDHD LTADRISLDM 

       430        440        450        460        470        480 
VQRACRDQMG REIALSEEDV HASLDPRISV ASRRDGGPAE EGVRMVLGKV QAKLDADRQD 

       490        500 
NRRRREVIDA ACRDRRRLME ELAG

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References

[1]"Complete genome sequence of the nitrogen-fixing bacterium Azorhizobium caulinodans ORS571."
Lee K.B., Backer P.D., Aono T., Liu C.T., Suzuki S., Suzuki T., Kaneko T., Yamada M., Tabata S., Kupfer D.M., Najar F.Z., Wiley G.B., Roe B., Binnewies T., Ussery D., Vereecke D., Gevers D., Holsters M., Oyaizu H.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP009384 Genomic DNA. Translation: BAF89871.1.
RefSeqYP_001526789.1. NC_009937.1.

3D structure databases

ProteinModelPortalA8IK84.
ModBaseSearch...

Protein-protein interaction databases

STRINGA8IK84.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5689166.
GenomeReviewsGene locus AZC_3873 in contig AP009384_GR.
KEGGazc:AZC_3873.
PATRIC21024601. VBIAzoCau17976_4040.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG539632.
OMAGMEREHE.
ProtClustDBCLSK953291.

Family and domain databases

HAMAPMF_00006. Arg_succ_lyase.
[Tree]
InterProIPR009049. Argininosuccinate_lyase.
IPR003031. D_crystallin.
IPR000362. Fumarate_lyase.
IPR008948. L-Aspartase-like.
IPR022761. Lyase1_N.
[Graphical view]
KOK01755.
PANTHERPTHR11444:SF3. argH. 1 hit.
PfamPF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSPR00145. ARGSUCLYASE.
PR00149. FUMRATELYASE.
SUPFAMSSF48557. L-Aspartase-like. 1 hit.
TIGRFAMsTIGR00838. ArgH. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA8IK84_AZOC5
AccessionPrimary (citable) accession number: A8IK84
Entry history
Integrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: December 14, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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