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A8IK30

- A8IK30_AZOC5

UniProt

A8IK30 - A8IK30_AZOC5

Protein
Submitted name:

Putative ATP dependent DNA ligase

Gene

AZC_0393

Organism
Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 41 (01 Oct 2014)
      Sequence version 1 (04 Dec 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciACAU438753:GJF3-396-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:AZC_0393Imported
    OrganismiAzorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571)Imported
    Taxonomic identifieri438753 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesXanthobacteraceaeAzorhizobium
    ProteomesiUP000000270: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi438753.AZC_0393.

    Structurei

    3D structure databases

    ProteinModelPortaliA8IK30.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000036007.
    KOiK01971.
    OMAiNRHKSGV.
    OrthoDBiEOG6Q8HXT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A8IK30-1 [UniParc]FASTAAdd to Basket

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    MNRFAELLDR LSYEPRRNAK IRLMSEYFRS TPDPERGVAL AALTGKLSFT    50
    NAKPGLIRAL IAERTDPVLF ELSYDYVGDL SETVALMWPA PKGLPEMGGN 100
    HAPFLSEIVE GLETLPKRDL PRQLALWLDG LDETGRWALL KLITGALRVG 150
    ASARLAKTAV AALGDLPPDE VELVWPGLSM PYRELFAWAE GKGERPQTTD 200
    PVPFRPVMLA HAIEETDFSA LDPASFAAEW KWDGIRVQAV CARSSDGTRA 250
    ARLYSRTGED ISGAFPDLVE ALDFDGALDG ELLIVREKRV ETFNVLQQRL 300
    NRKAVTTKML AEFPAHIRAY DLLAVAGEDL RPLPFRDRRA RLEALIARLE 350
    TQGHTRLDLS PLVPFADWEG LAAARRDPAS AGAGLDAEAV EGVMLKGWDT 400
    AYLPGRPKGP WWKWKRDPHT VDAVLMYAQR GHGKRSSFYS DYTFGVWTQG 450
    EEGDVLVPVG KAYFGFTDQE LIEIDKFVRR ATINRFGPVR EVLHEPDEGL 500
    VLEVAFEGLA RSTRHRSGVA MRFPRIARLR WDKPPREADR LETLEALLRQ 550
    EE 552
    Length:552
    Mass (Da):61,816
    Last modified:December 4, 2007 - v1
    Checksum:iC0DB76F6D3211380
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP009384 Genomic DNA. Translation: BAF86391.1.
    RefSeqiYP_001523309.1. NC_009937.1.

    Genome annotation databases

    EnsemblBacteriaiBAF86391; BAF86391; AZC_0393.
    GeneIDi5691328.
    KEGGiazc:AZC_0393.
    PATRICi21017253. VBIAzoCau17976_0408.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP009384 Genomic DNA. Translation: BAF86391.1 .
    RefSeqi YP_001523309.1. NC_009937.1.

    3D structure databases

    ProteinModelPortali A8IK30.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 438753.AZC_0393.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAF86391 ; BAF86391 ; AZC_0393 .
    GeneIDi 5691328.
    KEGGi azc:AZC_0393.
    PATRICi 21017253. VBIAzoCau17976_0408.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000036007.
    KOi K01971.
    OMAi NRHKSGV.
    OrthoDBi EOG6Q8HXT.

    Enzyme and pathway databases

    BioCyci ACAU438753:GJF3-396-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of the nitrogen-fixing bacterium Azorhizobium caulinodans ORS571."
      Lee K.B., Backer P.D., Aono T., Liu C.T., Suzuki S., Suzuki T., Kaneko T., Yamada M., Tabata S., Kupfer D.M., Najar F.Z., Wiley G.B., Roe B., Binnewies T., Ussery D., Vereecke D., Gevers D., Holsters M., Oyaizu H.
      Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 43989 / DSM 5975 / ORS 571Imported.

    Entry informationi

    Entry nameiA8IK30_AZOC5
    AccessioniPrimary (citable) accession number: A8IK30
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 4, 2007
    Last sequence update: December 4, 2007
    Last modified: October 1, 2014
    This is version 41 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3