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Protein
Submitted name:

Penicillin-binding protein 1A

Gene

AZC_3625

Organism
Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / NBRC 14845 / NCIMB 13405 / ORS 571)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciACAU438753:GJF3-3667-MONOMER.

Protein family/group databases

CAZyiGT51. Glycosyltransferase Family 51.

Names & Taxonomyi

Protein namesi
Submitted name:
Penicillin-binding protein 1AImported
Gene namesi
Ordered Locus Names:AZC_3625Imported
OrganismiAzorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / NBRC 14845 / NCIMB 13405 / ORS 571)Imported
Taxonomic identifieri438753 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesXanthobacteraceaeAzorhizobium
Proteomesi
  • UP000000270 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi438753.AZC_3625.

Structurei

3D structure databases

ProteinModelPortaliA8IFK5.
SMRiA8IFK5. Positions 67-252.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini59 – 236178TransglyInterPro annotationAdd
BLAST
Domaini325 – 442118PCB_OBInterPro annotationAdd
BLAST
Domaini444 – 737294TranspeptidaseInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4108JQC. Bacteria.
COG5009. LUCA.
HOGENOMiHOG000041137.
KOiK05366.
OMAiGRDYQKS.
OrthoDBiEOG6HMXCD.

Family and domain databases

Gene3Di3.40.710.10. 2 hits.
InterProiIPR012338. Beta-lactam/transpept-like.
IPR001264. Glyco_trans_51.
IPR023346. Lysozyme-like_dom.
IPR031376. PCB_OB.
IPR001460. PCN-bd_Tpept.
[Graphical view]
PfamiPF17092. PCB_OB. 1 hit.
PF00912. Transgly. 1 hit.
PF00905. Transpeptidase. 1 hit.
[Graphical view]
SUPFAMiSSF53955. SSF53955. 1 hit.
SSF56601. SSF56601. 3 hits.

Sequencei

Sequence statusi: Complete.

A8IFK5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRLVLRFFGF LFALGTLALL VGAAGATYFV WKYSQDLPDY TQLQNYEPPV
60 70 80 90 100
MTRVHAGDGS LVAEYARQKR LYVPIQSVPK LVVEAFLSAE DKNFYEHGGI
110 120 130 140 150
DPTGIFRAGM FYLQNLGTSR RPQGASTITQ QVAKNFLLTN EVSIDRKIKE
160 170 180 190 200
ALLALRIERT YSKDRILELY LNEIYLGSGS YGIAAAALTY FDKSVEDLNI
210 220 230 240 250
QQAAYLAALP KAPSSYNPYR NTDRAIERRN WVIDRMAENG YITAAQAETA
260 270 280 290 300
KKSPLEVTPR PTGAHIFAAE YYAEEVRRQI YERYGETKLY EGGLSVRTAL
310 320 330 340 350
DPRLQSIAKK TLMDGLIRFD EQRGWRGPVT KIEFAGDWGP KLAEAKTFYD
360 370 380 390 400
IPWKLAVVLD AGKDTARIGL QPPKDRSGGI SSARDVGLIN LDGVKWARWV
410 420 430 440 450
KGPDAGRAVS SVSQVLKTGD VIYVEAIPGK DGQYRLHQIP EIEGAITVME
460 470 480 490 500
PRTGRVLAMV GGFSYDESQF NRATQALRQP GSSFKPIVYS AALDNGYTPS
510 520 530 540 550
TVVLDAPIEI DQGPGLGVWA PENYAKKFYG PQTLRFGLEQ SRNVMTVRLA
560 570 580 590 600
QDIGMPLIAD YAKRFGVYDD MLPVLSMSLG AGETTLMRMV GAYAIIANGG
610 620 630 640 650
RKVTPSLIDR VQDRYGHTIF RHDERECRGC DATSWQNQPE PTLLDRRPVV
660 670 680 690 700
LDAMSTYQIT AMMEGVIQRG TGTALKDLGR PVAGKSGTTN DEKDAWFIAF
710 720 730 740 750
TPDMVVGMYL GYDRPRAMGK GSTGGVLTAP IVRDFMKSAL GDKPAVPFRV
760 770 780 790 800
PPGIKLVRIN PKTGLRAGPG EASILEGFKP GTAPPDSYSV IGTTDASIGV
810
TPEADRAVRS GTGGLY
Length:816
Mass (Da):89,641
Last modified:December 4, 2007 - v1
Checksum:iCF8A29D00AD5DE82
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP009384 Genomic DNA. Translation: BAF89623.1.
RefSeqiWP_012172148.1. NC_009937.1.

Genome annotation databases

EnsemblBacteriaiBAF89623; BAF89623; AZC_3625.
KEGGiazc:AZC_3625.
PATRICi21024095. VBIAzoCau17976_3790.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP009384 Genomic DNA. Translation: BAF89623.1.
RefSeqiWP_012172148.1. NC_009937.1.

3D structure databases

ProteinModelPortaliA8IFK5.
SMRiA8IFK5. Positions 67-252.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi438753.AZC_3625.

Protein family/group databases

CAZyiGT51. Glycosyltransferase Family 51.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAF89623; BAF89623; AZC_3625.
KEGGiazc:AZC_3625.
PATRICi21024095. VBIAzoCau17976_3790.

Phylogenomic databases

eggNOGiENOG4108JQC. Bacteria.
COG5009. LUCA.
HOGENOMiHOG000041137.
KOiK05366.
OMAiGRDYQKS.
OrthoDBiEOG6HMXCD.

Enzyme and pathway databases

BioCyciACAU438753:GJF3-3667-MONOMER.

Family and domain databases

Gene3Di3.40.710.10. 2 hits.
InterProiIPR012338. Beta-lactam/transpept-like.
IPR001264. Glyco_trans_51.
IPR023346. Lysozyme-like_dom.
IPR031376. PCB_OB.
IPR001460. PCN-bd_Tpept.
[Graphical view]
PfamiPF17092. PCB_OB. 1 hit.
PF00912. Transgly. 1 hit.
PF00905. Transpeptidase. 1 hit.
[Graphical view]
SUPFAMiSSF53955. SSF53955. 1 hit.
SSF56601. SSF56601. 3 hits.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of the nitrogen-fixing bacterium Azorhizobium caulinodans ORS571."
    Lee K.B., Backer P.D., Aono T., Liu C.T., Suzuki S., Suzuki T., Kaneko T., Yamada M., Tabata S., Kupfer D.M., Najar F.Z., Wiley G.B., Roe B., Binnewies T., Ussery D., Vereecke D., Gevers D., Holsters M., Oyaizu H.
    Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43989 / DSM 5975 / JCM 20966 / NBRC 14845 / NCIMB 13405 / ORS 571Imported.

Entry informationi

Entry nameiA8IFK5_AZOC5
AccessioniPrimary (citable) accession number: A8IFK5
Entry historyi
Integrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: March 16, 2016
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.