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Reviewed, UniProtKB/Swiss-Prot A8ICW0 (PYRB_AZOC5)

Last modified February 9, 2010. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Aspartate carbamoyltransferase
    EC=2.1.3.2
Alternative name(s):
    Aspartate transcarbamylase
      Short name=ATCase
Gene names
Name: pyrB
Ordered Locus Names: AZC_2851
OrganismAzorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) [Complete proteome] [HAMAP]
Taxonomic identifier438753 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesXanthobacteraceaeAzorhizobium

Protein attributes

Sequence length321 AA.
Sequence statusComplete.
Protein existenceInferred from homology.

General annotation (Comments)

Catalytic activity

Carbamoyl phosphate + L-aspartate = phosphate + N-carbamoyl-L-aspartate. HAMAP MF_00001

Pathway

Pyrimidine metabolism; UMP biosynthesis via de novo pathway; (S)-dihydroorotate from bicarbonate: step 2/3. HAMAP MF_00001

Sequence similarities

Belongs to the ATCase/OTCase family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 321321Aspartate carbamoyltransferase HAMAP MF_00001
PRO_0000321072

Sequences

Sequence LengthMass (Da)Tools
A8ICW0-1 [UniParc].

Last modified December 4, 2007. Version 1.
Checksum: 2E66C91ACBAAACCB

FASTA32134,923
        10         20         30         40         50         60 
MITAPFFTLD RRDLLGIEGL SAPEIVGLLD LAEEFVVLNR QIEKKRSTLR GRTQVNLFFE 

        70         80         90        100        110        120 
ASTRTQSSFE LAGKRLGADV MNMSVGNSSV KKGETLIDTA MTLNAMRPDI LVVRHHASGA 

       130        140        150        160        170        180 
VALLARKVDC CVVNAGDGAH EHPTQALLDA LTIRRNKGRI EGLTVAVCGD VLHSRVARSN 

       190        200        210        220        230        240 
ILLLHTLGAR VRVVAPSTLL PTGIENFGVE VHRSMESGLE GADIVMMLRL QRERMAGSFI 

       250        260        270        280        290        300 
PSVKEYFHYY GLDEAKLKRA KPDALVMHPG PMNRGVEIDS AVADGAQSLI REQVEMGVAV 

       310        320 
RMAVLDALAR KLPNATGAER D 

« Hide

References

[1]"Complete genome sequence of the nitrogen-fixing bacterium Azorhizobium caulinodans ORS571."
Lee K.B., Backer P.D., Aono T., Liu C.T., Suzuki S., Suzuki T., Kaneko T., Yamada M., Tabata S., Kupfer D.M., Najar F.Z., Wiley G.B., Roe B., Binnewies T., Ussery D., Vereecke D., Gevers D., Holsters M., Oyaizu H.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP009384 Genomic DNA. Translation: BAF88849.1.
RefSeqYP_001525767.1.

3D structure databases

SMRA8ICW0. Positions 9-309.
ModBaseSearch...

Genome annotation databases

GeneID5689256.
GenomeReviewsGene locus AZC_2851 in contig AP009384_GR.
KEGGazc:AZC_2851.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG579429.
OMAVMMLRVQ.

Family and domain databases

HAMAPMF_00001. Asp_carb_tr.
[Tree]
InterProIPR006132. Asp/Orn_carbamoyltranf_P_bd.
IPR006130. Asp/Orn_carbamoylTrfase.
IPR006131. Asp_carbamoyltransf_Asp/Orn_bd.
IPR002082. Asp_carbamoyltransf_euk.
[Graphical view]
PfamPF00185. OTCace. 1 hit.
PF02729. OTCace_N. 1 hit.
[Graphical view]
PRINTSPR00100. AOTCASE.
PR00101. ATCASE.
TIGRFAMsTIGR00670. asp_carb_tr. 1 hit.
PROSITEPS00097. CARBAMOYLTRANSFERASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry namePYRB_AZOC5
AccessionPrimary (citable) accession number: A8ICW0
Entry history
Integrated into UniProtKB/Swiss-Prot: February 26, 2008
Last sequence update: December 4, 2007
Last modified: February 9, 2010
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents