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Protein
Submitted name:

Predicted protein

Gene

CHLREDRAFT_96655

Organism
Chlamydomonas reinhardtii (Chlamydomonas smithii)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionHelicaseUniRule annotation, Hydrolase
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Predicted proteinImported
Gene namesi
ORF Names:CHLREDRAFT_96655Imported
OrganismiChlamydomonas reinhardtii (Chlamydomonas smithii)Imported
Taxonomic identifieri3055 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeChlorophytaChlorophyceaeChlamydomonadalesChlamydomonadaceaeChlamydomonas
Proteomesi
  • UP000006906 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiA8ICS4.

Interactioni

Protein-protein interaction databases

STRINGi3055.EDP06385.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini149 – 177Q_MOTIFInterPro annotationAdd BLAST29
Domaini180 – 354Helicase ATP-bindingInterPro annotationAdd BLAST175
Domaini365 – 536Helicase C-terminalInterPro annotationAdd BLAST172

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili528 – 563Sequence analysisAdd BLAST36

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi149 – 177Q motifPROSITE-ProRule annotationAdd BLAST29

Sequence similaritiesi

Belongs to the DEAD box helicase family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0338. Eukaryota.
COG0513. LUCA.
InParanoidiA8ICS4.
KOiK13181.

Family and domain databases

CDDicd00079. HELICc. 1 hit.
InterProiView protein in InterPro
IPR011545. DEAD/DEAH_box_helicase_dom.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
IPR000629. RNA-helicase_DEAD-box_CS.
IPR014014. RNA_helicase_DEAD_Q_motif.
PfamiView protein in Pfam
PF00270. DEAD. 1 hit.
PF00271. Helicase_C. 1 hit.
SMARTiView protein in SMART
SM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
SUPFAMiSSF52540. SSF52540. 2 hits.
PROSITEiView protein in PROSITE
PS00039. DEAD_ATP_HELICASE. 1 hit.
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
PS51195. Q_MOTIF. 1 hit.

Sequencei

Sequence statusi: Fragment.

A8ICS4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
DDDEEGAEED GEDEEDGEDD EEEEEEEEQA QPSGKQARAK QQQQQQQQQK
60 70 80 90 100
AKGRAKPESE EEEDDGDDEE EGDGAGSSGD DEEMDEDDDE DGEEEGDEEE
110 120 130 140 150
EEDRRPSTSG RGDKAAAAKG AKASAAAAGK GGKGTFYSET PEGTKFSSAS
160 170 180 190 200
FADLNISRPL LKAVEALGYK SPTPIQAACI PLALAGRDIC GSAVTGSGKT
210 220 230 240 250
AAFALPFLER LLHRPRGLAA TYVLVLTPTR ELAVQIHSMI EKLAQFTDIN
260 270 280 290 300
VALIVGGLSL QVQAITLRQS PEVVVATPGR LIDHLRNSQS VGLEDLAVLV
310 320 330 340 350
LDEADRLLEM GFREEVAEVV RAAPRKRQTM LFSATFNDQV RDLVALSLKQ
360 370 380 390 400
PVRLAADAAR AAPKLLTQEI VRLKGPAAAA TKEAVCLALC ARSFGDRGRT
410 420 430 440 450
IVFCSTKTKA HRLKILFGLA GLPPAAELHG NMSQTARLES LESFRRGDTA
460 470 480 490 500
FLLATDVAAR GLDIQGVEVV VNYDAPPKLE TYLHRIGRTA RAGAAGVAVT
510 520 530 540 550
LVEDGDRGLL KELGKKVGRA RLVPAAAVVQ WQSRVERLER DVRAILAEER
560 570 580 590 600
DEADLRKAEM EANKAVNMME HESEIMSRPK RTWFVTEKQK RELAARSAQA

AG
Length:602
Mass (Da):65,097
Last modified:December 4, 2007 - v1
Checksum:i8094D1EC8AEAE3FC
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1
Non-terminal residuei602Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS496115 Genomic DNA. Translation: EDP06385.1.
RefSeqiXP_001702606.1. XM_001702554.1.

Genome annotation databases

EnsemblPlantsiEDP06385; EDP06385; CHLREDRAFT_96655.
GeneIDi5728277.
GrameneiEDP06385; EDP06385; CHLREDRAFT_96655.
KEGGicre:CHLREDRAFT_96655.

Similar proteinsi

Entry informationi

Entry nameiA8ICS4_CHLRE
AccessioniPrimary (citable) accession number: A8ICS4
Entry historyiIntegrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: March 28, 2018
This is version 54 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported