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A8ICN2 (A8ICN2_CHLRE) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Predicted protein EMBL EDP06377.1
Gene names
ORF Names:CHLREDRAFT_96789 EMBL EDP06377.1
OrganismChlamydomonas reinhardtii (Chlamydomonas smithii) [Reference proteome]
Taxonomic identifier3055 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Chlorophyta › Chlorophyceae › Chlamydomonadales › Chlamydomonadaceae › Chlamydomonas

Protein attributes

Sequence length348 AA.
Sequence statusFragment.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. RuleBase RU000437

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue3481 EMBL EDP06377.1

Sequences

Sequence LengthMass (Da)Tools
A8ICN2 [UniParc].

Last modified December 4, 2007. Version 1.
Checksum: 85DB942A027BFF8A

FASTA34838,336
        10         20         30         40         50         60 
MARYSVAMVG SGAWACAAVR MIAQNTQVVS QSFVDEVRMW VYEEDFEVRP WGGKKLTEVI 

        70         80         90        100        110        120 
NQTHTNPKYF PGFDLGPNVV AVPNIVDAVA DADLIVFCAP HQFLHHICKQ LVGKIKPGAA 

       130        140        150        160        170        180 
AISLTKGMRV RPEGPQLISQ MVRRLLGIDC CVLMGANIAT DIGREQLSEA VIGYDNLDAA 

       190        200        210        220        230        240 
TLFQKIFQRP YFRVNLLPDP VGAEMCGTLK NIVALGAGMV DGLGLGPNSK AAIIRQGLVE 

       250        260        270        280        290        300 
MRAFSKALYP SVRDDTFMES CGVGDLVATC YGGRNRLVAC EWTKAQMPRT FEDLETDLLK 

       310        320        330        340 
GQKLQGVLTS NEVQEILKVR GWESQYPLFT TVNRIINGYL PPKYVVEF

« Hide

References

[1]"The Chlamydomonas genome reveals the evolution of key animal and plant functions."
Merchant S.S., Prochnik S.E., Vallon O., Harris E.H., Karpowicz S.J., Witman G.B., Terry A., Salamov A., Fritz-Laylin L.K., Marechal-Drouard L., Marshall W.F., Qu L.H., Nelson D.R., Sanderfoot A.A., Spalding M.H., Kapitonov V.V., Ren Q., Ferris P. expand/collapse author list , Lindquist E., Shapiro H., Lucas S.M., Grimwood J., Schmutz J., Cardol P., Cerutti H., Chanfreau G., Chen C.L., Cognat V., Croft M.T., Dent R., Dutcher S., Fernandez E., Fukuzawa H., Gonzalez-Ballester D., Gonzalez-Halphen D., Hallmann A., Hanikenne M., Hippler M., Inwood W., Jabbari K., Kalanon M., Kuras R., Lefebvre P.A., Lemaire S.D., Lobanov A.V., Lohr M., Manuell A., Meier I., Mets L., Mittag M., Mittelmeier T., Moroney J.V., Moseley J., Napoli C., Nedelcu A.M., Niyogi K., Novoselov S.V., Paulsen I.T., Pazour G.J., Purton S., Ral J.P., Riano-Pachon D.M., Riekhof W., Rymarquis L., Schroda M., Stern D., Umen J., Willows R., Wilson N., Zimmer S.L., Allmer J., Balk J., Bisova K., Chen C.J., Elias M., Gendler K., Hauser C., Lamb M.R., Ledford H., Long J.C., Minagawa J., Page M.D., Pan J., Pootakham W., Roje S., Rose A., Stahlberg E., Terauchi A.M., Yang P., Ball S., Bowler C., Dieckmann C.L., Gladyshev V.N., Green P., Jorgensen R., Mayfield S., Mueller-Roeber B., Rajamani S., Sayre R.T., Brokstein P., Dubchak I., Goodstein D., Hornick L., Huang Y.W., Jhaveri J., Luo Y., Martinez D., Ngau W.C., Otillar B., Poliakov A., Porter A., Szajkowski L., Werner G., Zhou K., Grigoriev I.V., Rokhsar D.S., Grossman A.R.
Science 318:245-250(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CC-503.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		DS496115 Genomic DNA. Translation: EDP06377.1.
RefSeqXP_001702598.1. XM_001702546.1.
UniGeneCre.471.

3D structure databases

ProteinModelPortalA8ICN2.
ModBaseSearch...

Protein-protein interaction databases

STRING3055.JGI96789.
A8ICN2.

Proteomic databases

PRIDEA8ICN2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsEDP06377; EDP06377; CHLREDRAFT_96789.
GeneID5728259.
KEGGcre:CHLREDRAFT_96789.

Phylogenomic databases

eggNOGCOG0240.
KOK00006.
ProtClustDBCLSN2923945.

Enzyme and pathway databases

BioCycCHLAMY:CHLREDRAFT_96789-MONOMER.

Family and domain databases

Gene3D1.10.1040.10. 1 hit.
3.40.50.720. 1 hit.
InterProIPR008927. 6-PGluconate_DH_C-like.
IPR013328. DH_multihelical.
IPR006168. G3P_DH_NAD-dep.
IPR006109. G3P_DH_NAD-dep_C.
IPR017751. G3P_DH_NAD-dep_euk.
IPR011128. G3P_DH_NAD-dep_N.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PANTHERPTHR11728. PTHR11728. 1 hit.
PfamPF07479. NAD_Gly3P_dh_C. 1 hit.
PF01210. NAD_Gly3P_dh_N. 1 hit.
[Graphical view]
PIRSFPIRSF000114. Glycerol-3-P_dh. 1 hit.
PRINTSPR00077. GPDHDRGNASE.
SUPFAMSSF48179. 6DGDH_C_like. 1 hit.
TIGRFAMsTIGR03376. glycerol3P_DH. 1 hit.
PROSITEPS00957. NAD_G3PDH. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA8ICN2_CHLRE
AccessionPrimary (citable) accession number: A8ICN2
Entry history
Integrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: April 3, 2013
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info