A8IAI6 (A8IAI6_AZOC5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Gram negative topoisomerase IV subunit B EMBL BAF88511.1

Gene names

Ordered Locus Names:

AZC_2513

Organism

Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) [Complete proteome] [HAMAP] EMBL BAF88511.1

Taxonomic identifier

438753 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Xanthobacteraceae › Azorhizobium

Protein attributes

Sequence length	672 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the type II topoisomerase family. RuleBase RU000380

Ontologies

Keywords
Ligand	ATP-binding RuleBase RU000380 SAAS SAAS002288 Nucleotide-binding
Molecular function	Isomerase Topoisomerase RuleBase RU000380 SAAS SAAS002288
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	DNA topological change Inferred from electronic annotation. Source: InterPro
Cellular component	chromosome Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW DNA topoisomerase (ATP-hydrolyzing) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A8IAI6 [UniParc]. Last modified December 4, 2007. Version 1. Checksum: 1047C411B776C579	FASTA	672	73,556
	10 20 30 40 50 60 MSNSDDLFSN PPPSRGRKTT VVPQMASDYT AAHIEVLEGL EPVRRRPGMY IGGTDAKALH 70 80 90 100 110 120 HLFAEVIDNS MDEAVAGHAT FIEVQLSNDG SLTVIDNGRG IPVEEHPKFP GKSALEVIMT 130 140 150 160 170 180 TLHSGGKFDS KVYETSGGLH GVGVSVVNAL SDAFEVEVAR NQTLYRQTFS RGTPQGKLKE 190 200 210 220 230 240 VGRITNRRGT KIRFHPDPDI FGPSAKFEPG RVFRMARAKA YLFGGVEIRW SCDPELLAGT 250 260 270 280 290 300 TGVPEKMTFR FPGGLRDYLA ADIEGQTLVH GDIFSGRVQK PGGHGSAEWA VAWIADGDGG 310 320 330 340 350 360 ISSYCNTIPT PDGGTHENGL RAVLLKGLRE HGERTNQSKR AALITGEDVT AGCAAMLSVF 370 380 390 400 410 420 VREPEFQGQT KERLATAEAA RIVEQTVRDP FDHWLAANPA QATRLFDHVV ERAEERLRRK 430 440 450 460 470 480 QEKEISRKTA VRKLRLPGKL ADCSNTEAAG SELFIVEGDS AGGSAKQARD RRTQAVLPLR 490 500 510 520 530 540 GKILNVANAG RDKLAQNQQL ADLGQALGCG TLSHYREADL RYEKVIIMTD ADVDGAHIAS 550 560 570 580 590 600 LLVTFFYRQM PKLVDEGHLF LAVPPLYRIT QGAKTLYARD DAHKEKLLKK EFNGRGKVEI 610 620 630 640 650 660 GRFKGLGEMM PAQLKETTMD PKTRTLLQVS IEEAARAATD DIVERLMGNK PEARFAFISE 670 HAAFAGEELL DI

References

[1]

"Complete genome sequence of the nitrogen-fixing bacterium Azorhizobium caulinodans ORS571." Lee K.B., Backer P.D., Aono T., Liu C.T., Suzuki S., Suzuki T., Kaneko T., Yamada M., Tabata S., Kupfer D.M., Najar F.Z., Wiley G.B., Roe B., Binnewies T., Ussery D., Vereecke D., Gevers D., Holsters M., Oyaizu H. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP009384 Genomic DNA. Translation: BAF88511.1.
RefSeq	YP_001525429.1. NC_009937.1.
3D structure databases
ProteinModelPortal	A8IAI6.
ModBase	Search...
Protein-protein interaction databases
STRING	A8IAI6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5690053.
GenomeReviews	Gene locus AZC_2513 in contig AP009384_GR.
KEGG	azc:AZC_2513.
PATRIC	21021747. VBIAzoCau17976_2628.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG304889.
OMA	QARDKEF.
ProtClustDB	PRK05559.
Family and domain databases
InterPro	IPR003594. ATPase-like_ATP-bd. IPR020568. Ribosomal_S5_D2-typ_fold. IPR014721. Ribosomal_S5_D2-typ_fold_subgr. IPR001241. Topo_IIA. IPR013759. Topo_IIA_B/N_ab. IPR002288. Topo_IIA_B_C. IPR013506. Topo_IIA_bsu_dom2. IPR013760. Topo_IIA_cen. IPR018522. TopoIIA_CS. IPR005737. TopoIV_B_Gneg. IPR006171. Toprim_domain. [Graphical view]
Gene3D	G3DSA:3.30.565.10. ATP_bd_ATPase. 1 hit. G3DSA:3.30.230.10. Ribosomal_S5_D2-type_fold. 1 hit. G3DSA:3.40.50.670. Topo_IIA_B/N_ab. 1 hit.
KO	K02622.
Pfam	PF00204. DNA_gyraseB. 1 hit. PF00986. DNA_gyraseB_C. 1 hit. PF02518. HATPase_c. 1 hit. PF01751. Toprim. 1 hit. [Graphical view]
PRINTS	PR00418. TPI2FAMILY.
SMART	SM00387. HATPase_c. 1 hit. SM00433. TOP2c. 1 hit. [Graphical view]
SUPFAM	SSF55874. ATP_bd_ATPase. 1 hit. SSF54211. Ribosomal_S5_D2-typ_fold. 1 hit. SSF56719. Topo_IIA_cen. 1 hit.
TIGRFAMs	TIGR01055. ParE_Gneg. 1 hit.
PROSITE	PS00177. TOPOISOMERASE_II. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A8IAI6_AZOC5

Accession

Primary (citable) accession number: A8IAI6

Entry history

Integrated into UniProtKB/TrEMBL:	December 4, 2007
Last sequence update:	December 4, 2007
Last modified:	January 25, 2012
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)