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Protein
Submitted name:

ABC transporter permease

Gene

AZC_2456

Organism
Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / NBRC 14845 / NCIMB 13405 / ORS 571)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Biological processi

Keywordsi

Biological processTransportUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
ABC transporter permeaseImported
Gene namesi
Ordered Locus Names:AZC_2456Imported
OrganismiAzorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / NBRC 14845 / NCIMB 13405 / ORS 571)Imported
Taxonomic identifieri438753 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesXanthobacteraceaeAzorhizobium
Proteomesi
  • UP000000270 Componenti: Chromosome

Subcellular locationi

  • Cell membrane UniRule annotation; Multi-pass membrane protein UniRule annotation

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei9 – 32HelicalUniRule annotationAdd BLAST24
Transmembranei38 – 56HelicalUniRule annotationAdd BLAST19
Transmembranei68 – 86HelicalUniRule annotationAdd BLAST19
Transmembranei98 – 124HelicalUniRule annotationAdd BLAST27
Transmembranei145 – 173HelicalUniRule annotationAdd BLAST29
Transmembranei193 – 214HelicalUniRule annotationAdd BLAST22
Transmembranei221 – 240HelicalUniRule annotationAdd BLAST20
Transmembranei252 – 271HelicalUniRule annotationAdd BLAST20

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi438753.AZC_2456

Structurei

3D structure databases

ProteinModelPortaliA8IA28
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini64 – 270ABC transmembrane type-1InterPro annotationAdd BLAST207

Sequence similaritiesi

Belongs to the binding-protein-dependent transport system permease family.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixUniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG4105G7C Bacteria
COG1176 LUCA
HOGENOMiHOG000263581
KOiK02054
OMAiQAFREVT
OrthoDBiPOG091H04PB

Family and domain databases

CDDicd06261 TM_PBP2, 1 hit
Gene3Di1.10.3720.10, 1 hit
InterProiView protein in InterPro
IPR000515 MetI-like
IPR035906 MetI-like_sf
PfamiView protein in Pfam
PF00528 BPD_transp_1, 1 hit
SUPFAMiSSF161098 SSF161098, 1 hit
PROSITEiView protein in PROSITE
PS50928 ABC_TM1, 1 hit

Sequencei

Sequence statusi: Complete.

A8IA28-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALRTGRRIF WWGLIAPTFV LYALIFFVPL GILGSESLHA GAGGGLTSAN
60 70 80 90 100
YAAFFTDGVT LSIFWRTVRL SLLITAACIL FGYPLALFMR RAGPVLRLVA
110 120 130 140 150
LTIVISPLLT SVVVRNVAWL LVLGREGMVN ALLRQSGLID GPLPLLYNTF
160 170 180 190 200
GVVVGVTHVY LAFLVMPVFS SLLSIDPSVE DAAASLGASR TTVFWRVTFP
210 220 230 240 250
LSLPGLIAGT TLVFVLSMGV YLTPVIMGGS FVTTLPMVMT DLVRNQFDWS
260 270 280
RAAAFAIVLL AFILIVLGLS SRAEKRIERM RGEGA
Length:285
Mass (Da):30,771
Last modified:December 4, 2007 - v1
Checksum:iC1E68D81FA9033E7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP009384 Genomic DNA Translation: BAF88454.1

Genome annotation databases

EnsemblBacteriaiBAF88454; BAF88454; AZC_2456
KEGGiazc:AZC_2456

Similar proteinsi

Entry informationi

Entry nameiA8IA28_AZOC5
AccessioniPrimary (citable) accession number: A8IA28
Entry historyiIntegrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: March 28, 2018
This is version 65 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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