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Protein
Submitted name:

ABC transporter permease

Gene

AZC_2456

Organism
Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / NBRC 14845 / NCIMB 13405 / ORS 571)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
ABC transporter permeaseImported
Gene namesi
Ordered Locus Names:AZC_2456Imported
OrganismiAzorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / NBRC 14845 / NCIMB 13405 / ORS 571)Imported
Taxonomic identifieri438753 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesXanthobacteraceaeAzorhizobium
Proteomesi
  • UP000000270 Componenti: Chromosome

Subcellular locationi

  • Cell membrane UniRule annotation; Multi-pass membrane protein UniRule annotation

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei9 – 32HelicalUniRule annotationAdd BLAST24
Transmembranei38 – 56HelicalUniRule annotationAdd BLAST19
Transmembranei68 – 86HelicalUniRule annotationAdd BLAST19
Transmembranei98 – 124HelicalUniRule annotationAdd BLAST27
Transmembranei145 – 173HelicalUniRule annotationAdd BLAST29
Transmembranei193 – 214HelicalUniRule annotationAdd BLAST22
Transmembranei221 – 240HelicalUniRule annotationAdd BLAST20
Transmembranei252 – 271HelicalUniRule annotationAdd BLAST20

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi438753.AZC_2456.

Structurei

3D structure databases

ProteinModelPortaliA8IA28.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini64 – 270ABC transmembrane type-1InterPro annotationAdd BLAST207

Sequence similaritiesi

Belongs to the binding-protein-dependent transport system permease family.UniRule annotation
Contains 1 ABC transmembrane type-1 domain.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixUniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG4105G7C. Bacteria.
COG1176. LUCA.
HOGENOMiHOG000263581.
KOiK02054.
OMAiTHVYLAF.
OrthoDBiPOG091H04PB.

Family and domain databases

CDDicd06261. TM_PBP2. 1 hit.
Gene3Di1.10.3720.10. 1 hit.
InterProiIPR000515. MetI-like.
[Graphical view]
PfamiPF00528. BPD_transp_1. 1 hit.
[Graphical view]
SUPFAMiSSF161098. SSF161098. 1 hit.
PROSITEiPS50928. ABC_TM1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A8IA28-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALRTGRRIF WWGLIAPTFV LYALIFFVPL GILGSESLHA GAGGGLTSAN
60 70 80 90 100
YAAFFTDGVT LSIFWRTVRL SLLITAACIL FGYPLALFMR RAGPVLRLVA
110 120 130 140 150
LTIVISPLLT SVVVRNVAWL LVLGREGMVN ALLRQSGLID GPLPLLYNTF
160 170 180 190 200
GVVVGVTHVY LAFLVMPVFS SLLSIDPSVE DAAASLGASR TTVFWRVTFP
210 220 230 240 250
LSLPGLIAGT TLVFVLSMGV YLTPVIMGGS FVTTLPMVMT DLVRNQFDWS
260 270 280
RAAAFAIVLL AFILIVLGLS SRAEKRIERM RGEGA
Length:285
Mass (Da):30,771
Last modified:December 4, 2007 - v1
Checksum:iC1E68D81FA9033E7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP009384 Genomic DNA. Translation: BAF88454.1.
RefSeqiWP_012170982.1. NC_009937.1.

Genome annotation databases

EnsemblBacteriaiBAF88454; BAF88454; AZC_2456.
KEGGiazc:AZC_2456.
PATRICi21021629. VBIAzoCau17976_2569.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP009384 Genomic DNA. Translation: BAF88454.1.
RefSeqiWP_012170982.1. NC_009937.1.

3D structure databases

ProteinModelPortaliA8IA28.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi438753.AZC_2456.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAF88454; BAF88454; AZC_2456.
KEGGiazc:AZC_2456.
PATRICi21021629. VBIAzoCau17976_2569.

Phylogenomic databases

eggNOGiENOG4105G7C. Bacteria.
COG1176. LUCA.
HOGENOMiHOG000263581.
KOiK02054.
OMAiTHVYLAF.
OrthoDBiPOG091H04PB.

Family and domain databases

CDDicd06261. TM_PBP2. 1 hit.
Gene3Di1.10.3720.10. 1 hit.
InterProiIPR000515. MetI-like.
[Graphical view]
PfamiPF00528. BPD_transp_1. 1 hit.
[Graphical view]
SUPFAMiSSF161098. SSF161098. 1 hit.
PROSITEiPS50928. ABC_TM1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiA8IA28_AZOC5
AccessioniPrimary (citable) accession number: A8IA28
Entry historyi
Integrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: November 30, 2016
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.