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Protein
Submitted name:

Chloroplast RecA recombination protein

Gene

RECA

Organism
Chlamydomonas reinhardtii (Chlamydomonas smithii)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

DNA damageUniRule annotation, DNA recombinationUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, DNA-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Chloroplast RecA recombination proteinImported
Gene namesi
Name:RECAImported
ORF Names:CHLREDRAFT_182459Imported
OrganismiChlamydomonas reinhardtii (Chlamydomonas smithii)Imported
Taxonomic identifieri3055 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeChlorophytaChlorophyceaeChlamydomonadalesChlamydomonadaceaeChlamydomonas
Proteomesi
  • UP000006906 Componenti: Unassembled WGS sequence

PTM / Processingi

Proteomic databases

PaxDbiA8I670.

Interactioni

Protein-protein interaction databases

STRINGi3055.EDP07229.

Structurei

3D structure databases

ProteinModelPortaliA8I670.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini92 – 250159RECA_2InterPro annotationAdd
BLAST
Domaini255 – 32470RECA_3InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the RecA family.UniRule annotation

Phylogenomic databases

eggNOGiKOG1433. Eukaryota.
COG0468. LUCA.
InParanoidiA8I670.
OMAiTRKGAWY.

Family and domain databases

Gene3Di3.30.250.10. 1 hit.
3.40.50.300. 1 hit.
HAMAPiMF_00268. RecA.
InterProiIPR003593. AAA+_ATPase.
IPR013765. DNA_recomb/repair_RecA.
IPR027417. P-loop_NTPase.
IPR020588. RecA_ATP-bd.
IPR023400. RecA_C.
IPR020587. RecA_monomer-monomer_interface.
[Graphical view]
PANTHERiPTHR22942:SF1. PTHR22942:SF1. 1 hit.
PfamiPF00154. RecA. 1 hit.
[Graphical view]
PRINTSiPR00142. RECA.
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
SSF54752. SSF54752. 1 hit.
TIGRFAMsiTIGR02012. tigrfam_recA. 1 hit.
PROSITEiPS50162. RECA_2. 1 hit.
PS50163. RECA_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A8I670-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQTAIQMPSG GCLSSGARAR SSARATQQIL CAPRRDVVAK ARRTKTATTT
60 70 80 90 100
YTQGERPDAD TKAKLFNETV DRITRRFGDG SIMRLSDSVT ANIETFPSGS
110 120 130 140 150
LTLDAALGGG YPRGRIIEVY GPEASGKTTL AMHACAEIQR LGGTVAYIDV
160 170 180 190 200
EHAFDRTYAE RLGINLNNFW YAQPMTGEEA LEVMDELCRS NVCDLVVIDS
210 220 230 240 250
VAALVPRAEL EGDIGSVQIG SQARLLSQAL RKLSASASKS KTTLFFINQL
260 270 280 290 300
RNKIGVMFGN PETTSGGNAL KYYSSVRIDI RKKETLSESD QAYANRVRAK
310 320 330 340 350
VVKNKVASPH KEALFEIYYG RGIDFLGGLI DTAERLKVLT RRGAFYYYGD
360 370 380 390 400
QRLGQGREKV LAALREDAER TAAIEAAVRD VLRANPDAAL VDTEEGDDDD
410
GLGTASTVAL DMDDV
Length:415
Mass (Da):45,116
Last modified:December 4, 2007 - v1
Checksum:i4E498F06168C1279
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS496113 Genomic DNA. Translation: EDP07229.1.
RefSeqiXP_001700975.1. XM_001700923.1.
UniGeneiCre.4675.

Genome annotation databases

EnsemblPlantsiEDP07229; EDP07229; CHLREDRAFT_182459.
GeneIDi5726340.
GrameneiEDP07229; EDP07229; CHLREDRAFT_182459.
KEGGicre:CHLREDRAFT_182459.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS496113 Genomic DNA. Translation: EDP07229.1.
RefSeqiXP_001700975.1. XM_001700923.1.
UniGeneiCre.4675.

3D structure databases

ProteinModelPortaliA8I670.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3055.EDP07229.

Proteomic databases

PaxDbiA8I670.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiEDP07229; EDP07229; CHLREDRAFT_182459.
GeneIDi5726340.
GrameneiEDP07229; EDP07229; CHLREDRAFT_182459.
KEGGicre:CHLREDRAFT_182459.

Phylogenomic databases

eggNOGiKOG1433. Eukaryota.
COG0468. LUCA.
InParanoidiA8I670.
OMAiTRKGAWY.

Family and domain databases

Gene3Di3.30.250.10. 1 hit.
3.40.50.300. 1 hit.
HAMAPiMF_00268. RecA.
InterProiIPR003593. AAA+_ATPase.
IPR013765. DNA_recomb/repair_RecA.
IPR027417. P-loop_NTPase.
IPR020588. RecA_ATP-bd.
IPR023400. RecA_C.
IPR020587. RecA_monomer-monomer_interface.
[Graphical view]
PANTHERiPTHR22942:SF1. PTHR22942:SF1. 1 hit.
PfamiPF00154. RecA. 1 hit.
[Graphical view]
PRINTSiPR00142. RECA.
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
SSF54752. SSF54752. 1 hit.
TIGRFAMsiTIGR02012. tigrfam_recA. 1 hit.
PROSITEiPS50162. RECA_2. 1 hit.
PS50163. RECA_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The Chlamydomonas genome reveals the evolution of key animal and plant functions."
    Merchant S.S., Prochnik S.E., Vallon O., Harris E.H., Karpowicz S.J., Witman G.B., Terry A., Salamov A., Fritz-Laylin L.K., Marechal-Drouard L., Marshall W.F., Qu L.H., Nelson D.R., Sanderfoot A.A., Spalding M.H., Kapitonov V.V., Ren Q., Ferris P.
    , Lindquist E., Shapiro H., Lucas S.M., Grimwood J., Schmutz J., Cardol P., Cerutti H., Chanfreau G., Chen C.L., Cognat V., Croft M.T., Dent R., Dutcher S., Fernandez E., Fukuzawa H., Gonzalez-Ballester D., Gonzalez-Halphen D., Hallmann A., Hanikenne M., Hippler M., Inwood W., Jabbari K., Kalanon M., Kuras R., Lefebvre P.A., Lemaire S.D., Lobanov A.V., Lohr M., Manuell A., Meier I., Mets L., Mittag M., Mittelmeier T., Moroney J.V., Moseley J., Napoli C., Nedelcu A.M., Niyogi K., Novoselov S.V., Paulsen I.T., Pazour G.J., Purton S., Ral J.P., Riano-Pachon D.M., Riekhof W., Rymarquis L., Schroda M., Stern D., Umen J., Willows R., Wilson N., Zimmer S.L., Allmer J., Balk J., Bisova K., Chen C.J., Elias M., Gendler K., Hauser C., Lamb M.R., Ledford H., Long J.C., Minagawa J., Page M.D., Pan J., Pootakham W., Roje S., Rose A., Stahlberg E., Terauchi A.M., Yang P., Ball S., Bowler C., Dieckmann C.L., Gladyshev V.N., Green P., Jorgensen R., Mayfield S., Mueller-Roeber B., Rajamani S., Sayre R.T., Brokstein P., Dubchak I., Goodstein D., Hornick L., Huang Y.W., Jhaveri J., Luo Y., Martinez D., Ngau W.C., Otillar B., Poliakov A., Porter A., Szajkowski L., Werner G., Zhou K., Grigoriev I.V., Rokhsar D.S., Grossman A.R.
    Science 318:245-250(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CC-503Imported.

Entry informationi

Entry nameiA8I670_CHLRE
AccessioniPrimary (citable) accession number: A8I670
Entry historyi
Integrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: March 16, 2016
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.