A8I4R6 (URED_AZOC5) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Urease accessory protein UreD

Gene names

Name:	ureD
Ordered Locus Names:	AZC_1763

Organism

Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) [Complete proteome] [HAMAP]

Taxonomic identifier

438753 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Xanthobacteraceae › Azorhizobium

Protein attributes

Sequence length	271 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Required for maturation of urease via the functional incorporation of the urease nickel metallocenter By similarity. HAMAP MF_01384
Subunit structure	UreD, UreF and UreG form a complex that acts as a GTP-hydrolysis-dependent molecular chaperone, activating the urease apoprotein by helping to assemble the nickel containing metallocenter of UreC. The UreE protein probably delivers the nickel By similarity.
Subcellular location	Cytoplasm By similarity HAMAP MF_01384.
Sequence similarities	Belongs to the UreD family.

Ontologies

Keywords
Biological process	Nickel insertion
Cellular component	Cytoplasm
Molecular function	Chaperone
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	nitrogen compound metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	nickel cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 271	271	Urease accessory protein UreD HAMAP MF_01384		PRO_0000340411

Sequences

	Sequence		Length	Mass (Da)
	A8I4R6 [UniParc]. Last modified December 4, 2007. Version 1. Checksum: 979B46049D1316A6	FASTA	271	28,912
	10 20 30 40 50 60 MAGAPRRQRA VGRVRLGVNA IAGKSRVSDV AEAGSLRVRM PRVDGPAVEG VLVNTAGGVA 70 80 90 100 110 120 CGDHFTIEVK AEAGAHAVVA TPAAEKIYRS DGETARIDVA ITVEAGAQVD WLPQETLLYD 130 140 150 160 170 180 AARLARRFTV DLAPDATFLA FEAIAFGRVA RGEEMRTGHL EDHWQVTRGG GLIYADAVRV 190 200 210 220 230 240 SGPLGELLRR PTVAAGNRAW ATLLYVAPDA EARLDEARAL MESARSECGA SAWNGLLAAR 250 260 270 WLAPDIETLR RDAVAFLNAF RGAPLPRVWA L

References

[1]

"Complete genome sequence of the nitrogen-fixing bacterium Azorhizobium caulinodans ORS571." Lee K.B., Backer P.D., Aono T., Liu C.T., Suzuki S., Suzuki T., Kaneko T., Yamada M., Tabata S., Kupfer D.M., Najar F.Z., Wiley G.B., Roe B., Binnewies T., Ussery D., Vereecke D., Gevers D., Holsters M., Oyaizu H. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43989 / DSM 5975 / ORS 571.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP009384 Genomic DNA. Translation: BAF87761.1.
RefSeq	YP_001524679.1. NC_009937.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A8I4R6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5688492.
GenomeReviews	Gene locus AZC_1763 in contig AP009384_GR.
KEGG	azc:AZC_1763.
PATRIC	21020177. VBIAzoCau17976_1849.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG711156.
OMA	QETILFD.
ProtClustDB	CLSK980186.
Enzyme and pathway databases
BioCyc	ACAU438753:AZC_1763-MONOMER.
Family and domain databases
HAMAP	MF_01384. UreD. [Tree]
InterPro	IPR002669. UreD. [Graphical view]
KO	K03190.
Pfam	PF01774. UreD. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

URED_AZOC5

Accession

Primary (citable) accession number: A8I4R6

Entry history

Integrated into UniProtKB/Swiss-Prot:	June 10, 2008
Last sequence update:	December 4, 2007
Last modified:	January 25, 2012
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program