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A8HV36

- A8HV36_AZOC5

UniProt

A8HV36 - A8HV36_AZOC5

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

AZC_1006

Organism
Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 40 (01 Oct 2014)
      Sequence version 1 (04 Dec 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro
    3. DNA primase activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciACAU438753:GJF3-1020-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:AZC_1006Imported
    OrganismiAzorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571)Imported
    Taxonomic identifieri438753 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesXanthobacteraceaeAzorhizobium
    ProteomesiUP000000270: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi438753.AZC_1006.

    Structurei

    3D structure databases

    ProteinModelPortaliA8HV36.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG3285.
    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiVAFTEWT.
    OrthoDBiEOG661H49.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A8HV36-1 [UniParc]FASTAAdd to Basket

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    MGLSTYRAKR DFTVTPEPDG GAKGKARAAA SASAGAYVIQ KHAARRLHYD    50
    LRLEMDGVLK SWAVTRGPSL VPGEKRLAVH VEDHPLAYGG FEGTIPEGQY 100
    GAGKVIVWDR GSWTPVGDPH KGYKKGHLEF ALDGEKLHGR WHLVRMSPHP 150
    GDKKENWLLI KVEDEAARPE GAPEITDEAP LSVVSGRDVE EVGAPSAAKS 200
    PKLSTAKTSR PKAAARDAKA SEEAETTASG AERGARAVSA PAKAKKTTAA 250
    RVNGRSTRAT AWDLPKGAKR APLPDFLPPA LATLARQAPK GRRYVHEIKF 300
    DGYRIAARLE DGEVRLLTRT GLDWSARFGT AIREAAAALP VSDAMLDGEV 350
    VVEGGNGASD FSALQADLSE GRTDRFVYYA FDLLHLDGHD LTGAPLAERK 400
    ALLEQLLTRA EGSGEGVLRY SGHFEDDGAM VLQHACRLSL EGVVSKLKDA 450
    PYHSGRSRDW IKSKCSERQE FVIGGFVPST TARKAIGSLV LGVYEGKRLV 500
    HVGRVGTGFS NKMASDLHTL LAPEAVEESP FSARLTADEA RGVTFVAPKR 550
    VAEVEFRAWT GDGHLRHAAF RGLRDDKAAA DVVREAASQP AETPKTPPKR 600
    RVRLTHPDRI YWPDAGVTKE GLADYYAEVW PRIAPFIVGR PLALVRCPEG 650
    IEGQHFFQKH PWKGADKALK EVHDPKAPDE PPYLAVETLD GLMALVQGAA 700
    LEIHPFGAPL SDWERPDLLT MDLDPGEGVP WSAVIAAAHE VKARLETAGL 750
    AAFVKTSGGK GLHVCAPLKP RADWTELKAF TKAMAETMAQ EAPDTYVATI 800
    TKAKRRGRIL VDYLRNQRGS TAVAPYSARA RAGAPVSMPI AWEELGEGMG 850
    PQHFTVLNAP ARLANLSADP WADFRKAAAP LPAGRTAGGT AGGKRRGGRR 900
    Length:900
    Mass (Da):97,010
    Last modified:December 4, 2007 - v1
    Checksum:iBF5C4DAD2A23637D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP009384 Genomic DNA. Translation: BAF87004.1.
    RefSeqiYP_001523922.1. NC_009937.1.

    Genome annotation databases

    EnsemblBacteriaiBAF87004; BAF87004; AZC_1006.
    GeneIDi5692334.
    KEGGiazc:AZC_1006.
    PATRICi21018545. VBIAzoCau17976_1043.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP009384 Genomic DNA. Translation: BAF87004.1 .
    RefSeqi YP_001523922.1. NC_009937.1.

    3D structure databases

    ProteinModelPortali A8HV36.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 438753.AZC_1006.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAF87004 ; BAF87004 ; AZC_1006 .
    GeneIDi 5692334.
    KEGGi azc:AZC_1006.
    PATRICi 21018545. VBIAzoCau17976_1043.

    Phylogenomic databases

    eggNOGi COG3285.
    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi VAFTEWT.
    OrthoDBi EOG661H49.

    Enzyme and pathway databases

    BioCyci ACAU438753:GJF3-1020-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of the nitrogen-fixing bacterium Azorhizobium caulinodans ORS571."
      Lee K.B., Backer P.D., Aono T., Liu C.T., Suzuki S., Suzuki T., Kaneko T., Yamada M., Tabata S., Kupfer D.M., Najar F.Z., Wiley G.B., Roe B., Binnewies T., Ussery D., Vereecke D., Gevers D., Holsters M., Oyaizu H.
      Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 43989 / DSM 5975 / ORS 571Imported.

    Entry informationi

    Entry nameiA8HV36_AZOC5
    AccessioniPrimary (citable) accession number: A8HV36
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 4, 2007
    Last sequence update: December 4, 2007
    Last modified: October 1, 2014
    This is version 40 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3