A8HU25 (A8HU25_AZOC5) Unreviewed, UniProtKB/TrEMBL
Last modified
May 1, 2013.
Version 48.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: Cyclic pyranopterin monophosphate synthase HAMAP-Rule MF_01225 EC=4.1.99.18 HAMAP-Rule MF_01225 Alternative name(s): Molybdenum cofactor biosynthesis protein A HAMAP-Rule MF_01225 | ||||
| Gene names |
| ||||
| Organism | Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) [Complete proteome] [HAMAP] EMBL BAF86897.1 | ||||
| Taxonomic identifier | 438753 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Xanthobacteraceae › Azorhizobium › ![]() |
Protein attributes
| Sequence length | 399 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Function | Catalyzes, together with MoaC, the conversion of 5'-GTP to cyclic pyranopterin monophosphate (cPMP or molybdopterin precursor Z) By similarity. SAAS SAAS010505 HAMAP-Rule MF_01225 |
| Catalytic activity | GTP = cyclic pyranopterin monophosphate + diphosphate. SAAS SAAS013483 HAMAP-Rule MF_01225 |
| Cofactor | Binds 2 4Fe-4S clusters. Binds 1 4Fe-4S cluster coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine and 1 4Fe-4S cluster coordinated with 3 cysteines and the GTP-derived substrate By similarity. SAAS SAAS013483 HAMAP-Rule MF_01225 |
| Pathway | Cofactor biosynthesis; molybdopterin biosynthesis. HAMAP-Rule MF_01225 SAAS SAAS013483 |
| Subunit structure | Monomer and homodimer By similarity. HAMAP-Rule MF_01225 SAAS SAAS010505 |
| Sequence similarities | Belongs to the radical SAM superfamily. MoaA family. HAMAP-Rule MF_01225 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Molybdenum cofactor biosynthesis SAAS SAAS013483 HAMAP-Rule MF_01225 |
| Ligand | 4Fe-4S SAAS SAAS013483 HAMAP-Rule MF_01225 GTP-binding HAMAP-Rule MF_01225 SAAS SAAS013483 Iron Iron-sulfur Metal-binding Nucleotide-binding S-adenosyl-L-methionine SAAS SAAS013483 HAMAP-Rule MF_01225 |
| Molecular function | Lyase SAAS SAAS013483 HAMAP-Rule MF_01225 |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological_process | Mo-molybdopterin cofactor biosynthetic process Inferred from electronic annotation. Source: HAMAP |
| Cellular_component | molybdopterin synthase complex Inferred from electronic annotation. Source: InterPro |
| Molecular_function | 4 iron, 4 sulfur cluster binding Inferred from electronic annotation. Source: UniProtKB-KW GTP bindingInferred from electronic annotation. Source: UniProtKB-KW lyase activityInferred from electronic annotation. Source: UniProtKB-KW metal ion bindingInferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Regions | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Region | 328 – 330 | 3 | GTP binding By similarity HAMAP-Rule MF_01225 | ||||||
Sites | |||||||||
| Metal binding | 90 | 1 | Iron-sulfur 1 (4Fe-4S-S-AdoMet) By similarity HAMAP-Rule MF_01225 | ||||||
| Metal binding | 94 | 1 | Iron-sulfur 1 (4Fe-4S-S-AdoMet) By similarity HAMAP-Rule MF_01225 | ||||||
| Metal binding | 97 | 1 | Iron-sulfur 1 (4Fe-4S-S-AdoMet) By similarity HAMAP-Rule MF_01225 | ||||||
| Metal binding | 323 | 1 | Iron-sulfur 2 (4Fe-4S-substrate) By similarity HAMAP-Rule MF_01225 | ||||||
| Metal binding | 326 | 1 | Iron-sulfur 2 (4Fe-4S-substrate) By similarity HAMAP-Rule MF_01225 | ||||||
| Metal binding | 340 | 1 | Iron-sulfur 2 (4Fe-4S-substrate) By similarity HAMAP-Rule MF_01225 | ||||||
| Binding site | 83 | 1 | GTP By similarity HAMAP-Rule MF_01225 | ||||||
| Binding site | 96 | 1 | S-adenosyl-L-methionine By similarity HAMAP-Rule MF_01225 | ||||||
| Binding site | 132 | 1 | GTP By similarity HAMAP-Rule MF_01225 | ||||||
| Binding site | 136 | 1 | S-adenosyl-L-methionine; via carbonyl oxygen By similarity HAMAP-Rule MF_01225 | ||||||
| Binding site | 166 | 1 | GTP By similarity HAMAP-Rule MF_01225 | ||||||
| Binding site | 190 | 1 | S-adenosyl-L-methionine By similarity HAMAP-Rule MF_01225 | ||||||
| Binding site | 226 | 1 | GTP By similarity HAMAP-Rule MF_01225 | ||||||
| Binding site | 260 | 1 | S-adenosyl-L-methionine; via amide nitrogen and carbonyl oxygen By similarity HAMAP-Rule MF_01225 | ||||||
Sequences
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References
| [1] | "Complete genome sequence of the nitrogen-fixing bacterium Azorhizobium caulinodans ORS571." Lee K.B., Backer P.D., Aono T., Liu C.T., Suzuki S., Suzuki T., Kaneko T., Yamada M., Tabata S., Kupfer D.M., Najar F.Z., Wiley G.B., Roe B., Binnewies T., Ussery D., Vereecke D., Gevers D., Holsters M., Oyaizu H. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43989 / DSM 5975 / ORS 571. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AP009384 Genomic DNA. Translation: BAF86897.1. |
| RefSeq | YP_001523815.1. NC_009937.1. |
3D structure databases | |
| ProteinModelPortal | A8HU25. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | 438753.AZC_0899. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblBacteria | BAF86897; BAF86897; AZC_0899. |
| GeneID | 5688930. |
| KEGG | azc:AZC_0899. |
| PATRIC | 21018325. VBIAzoCau17976_0933. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| eggNOG | COG2896. |
| HOGENOM | HOG000228680. |
| KO | K03639. |
| OMA | RNDHELV. |
| ProtClustDB | CLSK979411. |
Enzyme and pathway databases | |
| BioCyc | ACAU438753:GJF3-913-MONOMER. |
| UniPathway | UPA00344. |
Family and domain databases | |
| Gene3D | 3.20.20.70. 1 hit. |
| HAMAP | MF_01225_B. MoaA_B. |
| InterPro | IPR013785. Aldolase_TIM. IPR006638. Elp3/MiaB/NifB. IPR013483. MoaA. IPR000385. MoaA_NifB_PqqE_Fe-S-bd_CS. IPR010505. Mob_synth_C. IPR007197. rSAM. [Graphical view] |
| Pfam | PF06463. Mob_synth_C. 1 hit. PF04055. Radical_SAM. 1 hit. [Graphical view] |
| SMART | SM00729. Elp3. 1 hit. [Graphical view] |
| TIGRFAMs | TIGR02666. moaA. 1 hit. |
| PROSITE | PS01305. MOAA_NIFB_PQQE. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | A8HU25_AZOC5 | ||||||||
| Accession | Primary (citable) accession number: A8HU25 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with
