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A8HRW3

- A8HRW3_CHLRE

UniProt

A8HRW3 - A8HRW3_CHLRE

Protein
Submitted name:

Predicted protein

Gene

CHLREDRAFT_187878

Organism
Chlamydomonas reinhardtii (Chlamydomonas smithii)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 29 (01 Oct 2014)
      Sequence version 1 (04 Dec 2007)
      Previous versions | rss
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    Functioni

    GO - Biological processi

    1. double-strand break repair via homologous recombination Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Predicted proteinImported
    Gene namesi
    ORF Names:CHLREDRAFT_187878Imported
    OrganismiChlamydomonas reinhardtii (Chlamydomonas smithii)Imported
    Taxonomic identifieri3055 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeChlorophytaChlorophyceaeChlamydomonadalesChlamydomonadaceaeChlamydomonas
    ProteomesiUP000006906: Unassembled WGS sequence

    Interactioni

    Protein-protein interaction databases

    STRINGi3055.JGI413646.

    Structurei

    3D structure databases

    ProteinModelPortaliA8HRW3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG331296.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR015525. BRCA2.
    IPR015187. BRCA2_OB_1.
    IPR002093. BRCA2_repeat.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PANTHERiPTHR11289. PTHR11289. 1 hit.
    PfamiPF09103. BRCA-2_OB1. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS50138. BRCA2_REPEAT. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A8HRW3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAAPSCRRLT LEELAPMQAA FQPLAAAFAE LPFPDSQLLE CIKLLRGPAP     50
    PASEAAVTAV ANVAAVHALP AAPGGLALGV GAHDSRNGQA RSIAMVAATC 100
    LDGSLVLPGT CIEASIGSQL PEPVPPSVHM IPATCLDDYD DMLMLLPPPP 150
    PLESAAAEAE VDPVAVPELA GQPAVAGEDA FDYLLDEPTP PPKKLPKGTR 200
    YLKPGQRAGP PRLPQPAPGA APAPVPAAPQ PALQQPLRQP QENVQRSPRA 250
    GLPPASPQQP GPAQQARAWP PHSHQHYSHQ QQHPYQGLPQ PGLHRTASAS 300
    RLQGPAPTQP FDPSGLATAG PTLQLHAQRR PSTAGATSAQ YQPYTGHVAT 350
    APPAQPGSAP GSPLRAAGAA VTAAAAAEPG ASESEAGCPA QAAAEAVAGD 400
    AGDGSGDGAA GSGEGGFSNP NSRAAQIAEQ MRQRKLGRFG KPAVQPQPKP 450
    LQGPATSVSA AAGNASSSHA GDDSYGGFGS CSSFAAASSG GGGFSFANGK 500
    GVQISEAARQ RSAKLFANLD PTARGHTVPV SAKALERAAA ATAKLDKDGD 550
    AAAASVSARV SASAGLAPAS ASAPTSVLGA AAEFGQDLGG GMAATGFQTA 600
    GGRVVAVSAQ ALKRRAEFMA KLDKDGPLFG PDAAAAAEWD DVAAKRPCPS 650
    TVGGSTNSGG GNTGGGGGFS MPRAAPGTGA FKPPSRIGPS LLPQLGPAGG 700
    NSGGGAAAMA VPLPTLQFAS GKAIVVSEEA RRKGPDPGAE AAAPGQSGPD 750
    GQPAASGAGA ATPGLAGRGR GGAGGASPGG AAAASAACTP IAGLRGPPAS 800
    VGGLRRPRPS AAGDGSAARP PRPASAPAGA GGPGAGAMPP RPGMARAGSA 850
    AKRKFVSPVP AGDGAQAATA NKEEGAQLVM AAGGYTVVAP PPAQPEQAQQ 900
    WGWWGAAEAQ AALQALPEAG PGALSKVARP LASEEFPAHC RHKSLTPVEL 950
    AGGARPVLAT ILAHDRSATF PMVLTVSALP NQQQQQPKLS DGWYAVPAGL 1000
    DAALAQLVMA GRIRVGSKLR VCGAELASER PCDPLDGLTS GALLRLHYNG 1050
    VAPGGGPVSA TLLLVASRYG VMHVAGGVHR SPRAQEERVN RALVQRGEAA 1100
    SRASTAAQRA ELERCQRAAR GAPGPSVFPG YSIRVQRAYA NMVVAMLRLW 1150
    RLGPEQQEGF REGHVLLVSR VQQWVFLADH TSGMCGGAGL GGGEGAGGGG 1200
    GGTQPWMLAV KLIGSKEAID FIQDPQNQSG AIYSFKHLQL ITRDNANQLW 1250
    VAAAPDVCSL SRVAPPPPHS AGGGGGGGGQ QPGRRSSLGG GMASGPGSGD 1300
    PVQLELYGRK IDRLRGGGIR RMWVILLEVQ MGVEAHEGAA LQQPGEATGE 1350
    LTQVARV 1357
    Length:1,357
    Mass (Da):135,505
    Last modified:December 4, 2007 - v1
    Checksum:iE4E9FE4E5C9838ED
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DS496109 Genomic DNA. Translation: EDP08693.1.
    RefSeqiXP_001693439.1. XM_001693387.1.

    Genome annotation databases

    EnsemblPlantsiEDP08693; EDP08693; CHLREDRAFT_187878.
    GeneIDi5719065.
    KEGGicre:CHLREDRAFT_187878.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DS496109 Genomic DNA. Translation: EDP08693.1 .
    RefSeqi XP_001693439.1. XM_001693387.1.

    3D structure databases

    ProteinModelPortali A8HRW3.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 3055.JGI413646.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi EDP08693 ; EDP08693 ; CHLREDRAFT_187878 .
    GeneIDi 5719065.
    KEGGi cre:CHLREDRAFT_187878.

    Phylogenomic databases

    eggNOGi NOG331296.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR015525. BRCA2.
    IPR015187. BRCA2_OB_1.
    IPR002093. BRCA2_repeat.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    PANTHERi PTHR11289. PTHR11289. 1 hit.
    Pfami PF09103. BRCA-2_OB1. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS50138. BRCA2_REPEAT. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The Chlamydomonas genome reveals the evolution of key animal and plant functions."
      Merchant S.S., Prochnik S.E., Vallon O., Harris E.H., Karpowicz S.J., Witman G.B., Terry A., Salamov A., Fritz-Laylin L.K., Marechal-Drouard L., Marshall W.F., Qu L.H., Nelson D.R., Sanderfoot A.A., Spalding M.H., Kapitonov V.V., Ren Q., Ferris P.
      , Lindquist E., Shapiro H., Lucas S.M., Grimwood J., Schmutz J., Cardol P., Cerutti H., Chanfreau G., Chen C.L., Cognat V., Croft M.T., Dent R., Dutcher S., Fernandez E., Fukuzawa H., Gonzalez-Ballester D., Gonzalez-Halphen D., Hallmann A., Hanikenne M., Hippler M., Inwood W., Jabbari K., Kalanon M., Kuras R., Lefebvre P.A., Lemaire S.D., Lobanov A.V., Lohr M., Manuell A., Meier I., Mets L., Mittag M., Mittelmeier T., Moroney J.V., Moseley J., Napoli C., Nedelcu A.M., Niyogi K., Novoselov S.V., Paulsen I.T., Pazour G.J., Purton S., Ral J.P., Riano-Pachon D.M., Riekhof W., Rymarquis L., Schroda M., Stern D., Umen J., Willows R., Wilson N., Zimmer S.L., Allmer J., Balk J., Bisova K., Chen C.J., Elias M., Gendler K., Hauser C., Lamb M.R., Ledford H., Long J.C., Minagawa J., Page M.D., Pan J., Pootakham W., Roje S., Rose A., Stahlberg E., Terauchi A.M., Yang P., Ball S., Bowler C., Dieckmann C.L., Gladyshev V.N., Green P., Jorgensen R., Mayfield S., Mueller-Roeber B., Rajamani S., Sayre R.T., Brokstein P., Dubchak I., Goodstein D., Hornick L., Huang Y.W., Jhaveri J., Luo Y., Martinez D., Ngau W.C., Otillar B., Poliakov A., Porter A., Szajkowski L., Werner G., Zhou K., Grigoriev I.V., Rokhsar D.S., Grossman A.R.
      Science 318:245-250(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CC-503Imported.

    Entry informationi

    Entry nameiA8HRW3_CHLRE
    AccessioniPrimary (citable) accession number: A8HRW3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 4, 2007
    Last sequence update: December 4, 2007
    Last modified: October 1, 2014
    This is version 29 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3