A8HRG4 (A8HRG4_AZOC5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Choline dehydrogenase EMBL BAF87181.1

Gene names

Ordered Locus Names:

AZC_1183

Organism

Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) [Complete proteome] [HAMAP] EMBL BAF87181.1

Taxonomic identifier

438753 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Xanthobacteraceae › Azorhizobium

Protein attributes

Sequence length	562 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine By similarity. SAAS SAAS007867
Catalytic activity	Choline + acceptor = betaine aldehyde + reduced acceptor. SAAS SAAS007867
Cofactor	FAD By similarity. SAAS SAAS007867
Pathway	Amine and polyamine biosynthesis; betaine biosynthesis via choline pathway; betaine aldehyde from choline (cytochrome c reductase route): step 1/1. SAAS SAAS007867

Ontologies

Keywords
Ligand	FAD SAAS SAAS011533 Flavoprotein SAAS SAAS011533
Molecular function	Oxidoreductase SAAS SAAS007867
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycine betaine biosynthetic process from choline Inferred from electronic annotation. Source: InterPro
Molecular function	choline dehydrogenase activity Inferred from electronic annotation. Source: InterPro flavin adenine dinucleotide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A8HRG4 [UniParc]. Last modified December 4, 2007. Version 1. Checksum: 59F8ABEFB370E002	FASTA	562	61,378
	10 20 30 40 50 60 MMERTVASPA SPAIFDYVIV GSGSAGAVLA DRLSADGRFT VHVLEYGGSD RSLLIQMPAA 70 80 90 100 110 120 LSIPMNMPKY NWGFETEPEP GLGGRRLVCP RGKVIGGSSS VNGMVYVRGN PHDFDRWEEE 130 140 150 160 170 180 GAQGWGYRHV LPYFQRAESR QEGGDAYRGA TGPLATRYGP LENPLYNVFV EAARQAGYPA 190 200 210 220 230 240 TSDINGAQQE GFGRMDMTVK DGVRWSTANA YLKPALKRPN LSLETHALVL AVELEGRRAV 250 260 270 280 290 300 GVRYERDGTE QIVKASREVI LAAGPINSPK LLKLSGIGPA QELADLGIPV VADRPGVGEN 310 320 330 340 350 360 LQDHLEFYFQ VACTQPITLY SKTGLLSRGL VGAQWLLARS GLGASNHFES CGFIRSRAGI 370 380 390 400 410 420 RYPDIQYHFL PLAVSYDGKG LASEHGFQAH VGPMRSKSRG WVRLRSRDAR EHPRIFFNYL 430 440 450 460 470 480 GHEDDITEMR ACVRLTREIF AQAAFDPYRG REIQPGADVT SDEAIDAFVR EKVESAYHPS 490 500 510 520 530 540 CSCRMGRADD PMAVVTPDTK VIGIEGLRVV DSSIMPSVTT GNLNAPTIMI GEKASDIILG 550 560 KPALAASNAP YYTAENWRTA QR

References

[1]

"Complete genome sequence of the nitrogen-fixing bacterium Azorhizobium caulinodans ORS571." Lee K.B., Backer P.D., Aono T., Liu C.T., Suzuki S., Suzuki T., Kaneko T., Yamada M., Tabata S., Kupfer D.M., Najar F.Z., Wiley G.B., Roe B., Binnewies T., Ussery D., Vereecke D., Gevers D., Holsters M., Oyaizu H. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP009384 Genomic DNA. Translation: BAF87181.1.
RefSeq	YP_001524099.1. NC_009937.1.
3D structure databases
ProteinModelPortal	A8HRG4.
ModBase	Search...
Protein-protein interaction databases
STRING	A8HRG4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5689270.
GenomeReviews	Gene locus AZC_1183 in contig AP009384_GR.
KEGG	azc:AZC_1183.
PATRIC	21018935. VBIAzoCau17976_1237.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG734713.
OMA	HMTVKNG.
ProtClustDB	CLSK971246.
Family and domain databases
InterPro	IPR011533. Choline_dehydrogenase. IPR012132. GMC_OxRdtase. IPR000172. GMC_OxRdtase_N. IPR007867. GMC_OxRtase_C. [Graphical view]
KO	K00108.
Pfam	PF05199. GMC_oxred_C. 1 hit. PF00732. GMC_oxred_N. 1 hit. [Graphical view]
PIRSF	PIRSF000137. Alcohol_oxidase. 1 hit.
TIGRFAMs	TIGR01810. BetA. 1 hit.
PROSITE	PS00623. GMC_OXRED_1. 1 hit. PS00624. GMC_OXRED_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A8HRG4_AZOC5

Accession

Primary (citable) accession number: A8HRG4

Entry history

Integrated into UniProtKB/TrEMBL:	December 4, 2007
Last sequence update:	December 4, 2007
Last modified:	January 25, 2012
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)