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A8HP06

- A8HP06_CHLRE

UniProt

A8HP06 - A8HP06_CHLRE

Protein
Submitted name:

Succinate dehydrogenase subunit A

Gene

SDH1

Organism
Chlamydomonas reinhardtii (Chlamydomonas smithii)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 41 (01 Oct 2014)
      Sequence version 1 (04 Dec 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: EnsemblPlants/Gramene
    2. cobalt ion binding Source: EnsemblPlants/Gramene
    3. flavin adenine dinucleotide binding Source: InterPro
    4. oxidoreductase activity, acting on the CH-CH group of donors Source: InterPro

    GO - Biological processi

    1. electron transport chain Source: InterPro
    2. tricarboxylic acid cycle Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Succinate dehydrogenase subunit AImported
    Gene namesi
    Name:SDH1Imported
    ORF Names:CHLREDRAFT_195972Imported
    OrganismiChlamydomonas reinhardtii (Chlamydomonas smithii)Imported
    Taxonomic identifieri3055 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeChlorophytaChlorophyceaeChlamydomonadalesChlamydomonadaceaeChlamydomonas
    ProteomesiUP000006906: Unassembled WGS sequence

    Subcellular locationi

    GO - Cellular componenti

    1. cell wall Source: EnsemblPlants/Gramene

    PTM / Processingi

    Proteomic databases

    PRIDEiA8HP06.
    ProMEXiA8HP06.

    Interactioni

    Protein-protein interaction databases

    STRINGi3055.JGI394775.

    Structurei

    3D structure databases

    ProteinModelPortaliA8HP06.
    SMRiA8HP06. Positions 42-635.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1053.
    KOiK00234.

    Family and domain databases

    Gene3Di1.20.58.100. 1 hit.
    3.90.700.10. 1 hit.
    InterProiIPR003953. FAD_bind_dom.
    IPR003952. FRD_SDH_FAD_BS.
    IPR015939. Fum_Rdtase/Succ_DH_flav-like_C.
    IPR027477. Succ_DH/fumarate_Rdtase_cat.
    IPR011281. Succ_DH_flav_su_fwd.
    IPR014006. Succ_Dhase_FrdA_Gneg.
    [Graphical view]
    PfamiPF00890. FAD_binding_2. 1 hit.
    PF02910. Succ_DH_flav_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF46977. SSF46977. 1 hit.
    SSF56425. SSF56425. 1 hit.
    TIGRFAMsiTIGR01816. sdhA_forward. 1 hit.
    TIGR01812. sdhA_frdA_Gneg. 1 hit.
    PROSITEiPS00504. FRD_SDH_FAD_BINDING. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A8HP06-1 [UniParc]FASTAAdd to Basket

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    MPVLAKLLGG ASKASSLQQL AGLGQRAALA ATQQAGFASQ SYPVIDHQYD    50
    AIVVGAGGAG LRAAVGLSEL GFNTACITKL FPTRSHTVAA QGGINAALGN 100
    MTEDDWRWHA YDTIKGSDWL GDQDAIHYMC REAPKAVIEL ENYGLPFSRT 150
    EDGKIYQRAF GGQSLDFGKG GQAYRCACAA DRTGHAMLHT LYGQAMKHDI 200
    QFYVEYFALD LIMDSDGVCR GVMALCMEDG TLHRFQAHQT VLATGGYGRA 250
    YFSATSAHTC TGDGNAMAAR AGIPLQDLEF VQFHPTGIYG AGCLITEGSR 300
    GEGGILRNSE GERFMERYAP TAKDLASRDV VSRSMTMEIR EGRGCGPEKD 350
    HIYLHLNHLP PELLAERLPG ISETAAIFAG VDVTKEPIPV LPTVHYNMGG 400
    VPTNYMGEVL APTPDNPDKV VPGLFAAGEA ACASVHGANR LGANSLLDIV 450
    VFGRACANRI GQIMKPNTPH KPLPATAGEG AVARLDKLRN AKGNLRTAEI 500
    RRNMQKVMQN NAAVFRTQES LEEGCKLIDE TMASFQDVKT TDRGLVWNTD 550
    LIETLELENL LINAAVTMHS AEKRKESRGA HAREDFTQRD DANWMKHTLG 600
    FLPSTNDKVN ISYRPVHMKP LSEEMPFIPP KPRVY 635
    Length:635
    Mass (Da):68,880
    Last modified:December 4, 2007 - v1
    Checksum:i43DD0434281CE093
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DS496108 Genomic DNA. Translation: EDP09580.1.
    RefSeqiXP_001689842.1. XM_001689790.1.
    UniGeneiCre.3143.

    Genome annotation databases

    EnsemblPlantsiEDP09580; EDP09580; CHLREDRAFT_195972.
    GeneIDi5715870.
    KEGGicre:CHLREDRAFT_195972.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DS496108 Genomic DNA. Translation: EDP09580.1 .
    RefSeqi XP_001689842.1. XM_001689790.1.
    UniGenei Cre.3143.

    3D structure databases

    ProteinModelPortali A8HP06.
    SMRi A8HP06. Positions 42-635.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 3055.JGI394775.

    Proteomic databases

    PRIDEi A8HP06.
    ProMEXi A8HP06.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi EDP09580 ; EDP09580 ; CHLREDRAFT_195972 .
    GeneIDi 5715870.
    KEGGi cre:CHLREDRAFT_195972.

    Phylogenomic databases

    eggNOGi COG1053.
    KOi K00234.

    Family and domain databases

    Gene3Di 1.20.58.100. 1 hit.
    3.90.700.10. 1 hit.
    InterProi IPR003953. FAD_bind_dom.
    IPR003952. FRD_SDH_FAD_BS.
    IPR015939. Fum_Rdtase/Succ_DH_flav-like_C.
    IPR027477. Succ_DH/fumarate_Rdtase_cat.
    IPR011281. Succ_DH_flav_su_fwd.
    IPR014006. Succ_Dhase_FrdA_Gneg.
    [Graphical view ]
    Pfami PF00890. FAD_binding_2. 1 hit.
    PF02910. Succ_DH_flav_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF46977. SSF46977. 1 hit.
    SSF56425. SSF56425. 1 hit.
    TIGRFAMsi TIGR01816. sdhA_forward. 1 hit.
    TIGR01812. sdhA_frdA_Gneg. 1 hit.
    PROSITEi PS00504. FRD_SDH_FAD_BINDING. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The Chlamydomonas genome reveals the evolution of key animal and plant functions."
      Merchant S.S., Prochnik S.E., Vallon O., Harris E.H., Karpowicz S.J., Witman G.B., Terry A., Salamov A., Fritz-Laylin L.K., Marechal-Drouard L., Marshall W.F., Qu L.H., Nelson D.R., Sanderfoot A.A., Spalding M.H., Kapitonov V.V., Ren Q., Ferris P.
      , Lindquist E., Shapiro H., Lucas S.M., Grimwood J., Schmutz J., Cardol P., Cerutti H., Chanfreau G., Chen C.L., Cognat V., Croft M.T., Dent R., Dutcher S., Fernandez E., Fukuzawa H., Gonzalez-Ballester D., Gonzalez-Halphen D., Hallmann A., Hanikenne M., Hippler M., Inwood W., Jabbari K., Kalanon M., Kuras R., Lefebvre P.A., Lemaire S.D., Lobanov A.V., Lohr M., Manuell A., Meier I., Mets L., Mittag M., Mittelmeier T., Moroney J.V., Moseley J., Napoli C., Nedelcu A.M., Niyogi K., Novoselov S.V., Paulsen I.T., Pazour G.J., Purton S., Ral J.P., Riano-Pachon D.M., Riekhof W., Rymarquis L., Schroda M., Stern D., Umen J., Willows R., Wilson N., Zimmer S.L., Allmer J., Balk J., Bisova K., Chen C.J., Elias M., Gendler K., Hauser C., Lamb M.R., Ledford H., Long J.C., Minagawa J., Page M.D., Pan J., Pootakham W., Roje S., Rose A., Stahlberg E., Terauchi A.M., Yang P., Ball S., Bowler C., Dieckmann C.L., Gladyshev V.N., Green P., Jorgensen R., Mayfield S., Mueller-Roeber B., Rajamani S., Sayre R.T., Brokstein P., Dubchak I., Goodstein D., Hornick L., Huang Y.W., Jhaveri J., Luo Y., Martinez D., Ngau W.C., Otillar B., Poliakov A., Porter A., Szajkowski L., Werner G., Zhou K., Grigoriev I.V., Rokhsar D.S., Grossman A.R.
      Science 318:245-250(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CC-503Imported.

    Entry informationi

    Entry nameiA8HP06_CHLRE
    AccessioniPrimary (citable) accession number: A8HP06
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 4, 2007
    Last sequence update: December 4, 2007
    Last modified: October 1, 2014
    This is version 41 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3