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Protein
Submitted name:

Succinate dehydrogenase subunit A

Gene

SDH1

Organism
Chlamydomonas reinhardtii (Chlamydomonas smithii)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. flavin adenine dinucleotide binding Source: InterPro
  2. oxidoreductase activity, acting on the CH-CH group of donors Source: InterPro

GO - Biological processi

  1. electron transport chain Source: InterPro
  2. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Succinate dehydrogenase subunit AImported
Gene namesi
Name:SDH1Imported
ORF Names:CHLREDRAFT_195972Imported
OrganismiChlamydomonas reinhardtii (Chlamydomonas smithii)Imported
Taxonomic identifieri3055 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeChlorophytaChlorophyceaeChlamydomonadalesChlamydomonadaceaeChlamydomonas
ProteomesiUP000006906: Unassembled WGS sequence

PTM / Processingi

Proteomic databases

PRIDEiA8HP06.
ProMEXiA8HP06.

Interactioni

Protein-protein interaction databases

STRINGi3055.JGI394775.

Structurei

3D structure databases

ProteinModelPortaliA8HP06.
SMRiA8HP06. Positions 42-635.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1053.
InParanoidiA8HP06.
KOiK00234.

Family and domain databases

Gene3Di1.20.58.100. 1 hit.
3.90.700.10. 1 hit.
InterProiIPR003953. FAD_bind_dom.
IPR003952. FRD_SDH_FAD_BS.
IPR015939. Fum_Rdtase/Succ_DH_flav-like_C.
IPR027477. Succ_DH/fumarate_Rdtase_cat.
IPR011281. Succ_DH_flav_su_fwd.
IPR014006. Succ_Dhase_FrdA_Gneg.
[Graphical view]
PfamiPF00890. FAD_binding_2. 1 hit.
PF02910. Succ_DH_flav_C. 1 hit.
[Graphical view]
SUPFAMiSSF46977. SSF46977. 1 hit.
SSF56425. SSF56425. 1 hit.
TIGRFAMsiTIGR01816. sdhA_forward. 1 hit.
TIGR01812. sdhA_frdA_Gneg. 1 hit.
PROSITEiPS00504. FRD_SDH_FAD_BINDING. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A8HP06-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPVLAKLLGG ASKASSLQQL AGLGQRAALA ATQQAGFASQ SYPVIDHQYD
60 70 80 90 100
AIVVGAGGAG LRAAVGLSEL GFNTACITKL FPTRSHTVAA QGGINAALGN
110 120 130 140 150
MTEDDWRWHA YDTIKGSDWL GDQDAIHYMC REAPKAVIEL ENYGLPFSRT
160 170 180 190 200
EDGKIYQRAF GGQSLDFGKG GQAYRCACAA DRTGHAMLHT LYGQAMKHDI
210 220 230 240 250
QFYVEYFALD LIMDSDGVCR GVMALCMEDG TLHRFQAHQT VLATGGYGRA
260 270 280 290 300
YFSATSAHTC TGDGNAMAAR AGIPLQDLEF VQFHPTGIYG AGCLITEGSR
310 320 330 340 350
GEGGILRNSE GERFMERYAP TAKDLASRDV VSRSMTMEIR EGRGCGPEKD
360 370 380 390 400
HIYLHLNHLP PELLAERLPG ISETAAIFAG VDVTKEPIPV LPTVHYNMGG
410 420 430 440 450
VPTNYMGEVL APTPDNPDKV VPGLFAAGEA ACASVHGANR LGANSLLDIV
460 470 480 490 500
VFGRACANRI GQIMKPNTPH KPLPATAGEG AVARLDKLRN AKGNLRTAEI
510 520 530 540 550
RRNMQKVMQN NAAVFRTQES LEEGCKLIDE TMASFQDVKT TDRGLVWNTD
560 570 580 590 600
LIETLELENL LINAAVTMHS AEKRKESRGA HAREDFTQRD DANWMKHTLG
610 620 630
FLPSTNDKVN ISYRPVHMKP LSEEMPFIPP KPRVY
Length:635
Mass (Da):68,880
Last modified:December 4, 2007 - v1
Checksum:i43DD0434281CE093
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS496108 Genomic DNA. Translation: EDP09580.1.
RefSeqiXP_001689842.1. XM_001689790.1.
UniGeneiCre.3143.

Genome annotation databases

EnsemblPlantsiEDP09580; EDP09580; CHLREDRAFT_195972.
GeneIDi5715870.
KEGGicre:CHLREDRAFT_195972.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS496108 Genomic DNA. Translation: EDP09580.1.
RefSeqiXP_001689842.1. XM_001689790.1.
UniGeneiCre.3143.

3D structure databases

ProteinModelPortaliA8HP06.
SMRiA8HP06. Positions 42-635.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3055.JGI394775.

Proteomic databases

PRIDEiA8HP06.
ProMEXiA8HP06.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiEDP09580; EDP09580; CHLREDRAFT_195972.
GeneIDi5715870.
KEGGicre:CHLREDRAFT_195972.

Phylogenomic databases

eggNOGiCOG1053.
InParanoidiA8HP06.
KOiK00234.

Family and domain databases

Gene3Di1.20.58.100. 1 hit.
3.90.700.10. 1 hit.
InterProiIPR003953. FAD_bind_dom.
IPR003952. FRD_SDH_FAD_BS.
IPR015939. Fum_Rdtase/Succ_DH_flav-like_C.
IPR027477. Succ_DH/fumarate_Rdtase_cat.
IPR011281. Succ_DH_flav_su_fwd.
IPR014006. Succ_Dhase_FrdA_Gneg.
[Graphical view]
PfamiPF00890. FAD_binding_2. 1 hit.
PF02910. Succ_DH_flav_C. 1 hit.
[Graphical view]
SUPFAMiSSF46977. SSF46977. 1 hit.
SSF56425. SSF56425. 1 hit.
TIGRFAMsiTIGR01816. sdhA_forward. 1 hit.
TIGR01812. sdhA_frdA_Gneg. 1 hit.
PROSITEiPS00504. FRD_SDH_FAD_BINDING. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The Chlamydomonas genome reveals the evolution of key animal and plant functions."
    Merchant S.S., Prochnik S.E., Vallon O., Harris E.H., Karpowicz S.J., Witman G.B., Terry A., Salamov A., Fritz-Laylin L.K., Marechal-Drouard L., Marshall W.F., Qu L.H., Nelson D.R., Sanderfoot A.A., Spalding M.H., Kapitonov V.V., Ren Q., Ferris P.
    , Lindquist E., Shapiro H., Lucas S.M., Grimwood J., Schmutz J., Cardol P., Cerutti H., Chanfreau G., Chen C.L., Cognat V., Croft M.T., Dent R., Dutcher S., Fernandez E., Fukuzawa H., Gonzalez-Ballester D., Gonzalez-Halphen D., Hallmann A., Hanikenne M., Hippler M., Inwood W., Jabbari K., Kalanon M., Kuras R., Lefebvre P.A., Lemaire S.D., Lobanov A.V., Lohr M., Manuell A., Meier I., Mets L., Mittag M., Mittelmeier T., Moroney J.V., Moseley J., Napoli C., Nedelcu A.M., Niyogi K., Novoselov S.V., Paulsen I.T., Pazour G.J., Purton S., Ral J.P., Riano-Pachon D.M., Riekhof W., Rymarquis L., Schroda M., Stern D., Umen J., Willows R., Wilson N., Zimmer S.L., Allmer J., Balk J., Bisova K., Chen C.J., Elias M., Gendler K., Hauser C., Lamb M.R., Ledford H., Long J.C., Minagawa J., Page M.D., Pan J., Pootakham W., Roje S., Rose A., Stahlberg E., Terauchi A.M., Yang P., Ball S., Bowler C., Dieckmann C.L., Gladyshev V.N., Green P., Jorgensen R., Mayfield S., Mueller-Roeber B., Rajamani S., Sayre R.T., Brokstein P., Dubchak I., Goodstein D., Hornick L., Huang Y.W., Jhaveri J., Luo Y., Martinez D., Ngau W.C., Otillar B., Poliakov A., Porter A., Szajkowski L., Werner G., Zhou K., Grigoriev I.V., Rokhsar D.S., Grossman A.R.
    Science 318:245-250(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CC-503Imported.

Entry informationi

Entry nameiA8HP06_CHLRE
AccessioniPrimary (citable) accession number: A8HP06
Entry historyi
Integrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: January 7, 2015
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.