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A8HP06

- A8HP06_CHLRE

UniProt

A8HP06 - A8HP06_CHLRE

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Protein
Submitted name: Succinate dehydrogenase subunit A
Gene
SDH1, CHLREDRAFT_195972
Organism
Chlamydomonas reinhardtii (Chlamydomonas smithii)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. ATP binding Source: EnsemblPlants/Gramene
  2. cobalt ion binding Source: EnsemblPlants/Gramene
  3. flavin adenine dinucleotide binding Source: InterPro
  4. oxidoreductase activity, acting on the CH-CH group of donors Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. electron transport chain Source: InterPro
  2. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Succinate dehydrogenase subunit AImported
Gene namesi
Name:SDH1Imported
ORF Names:CHLREDRAFT_195972Imported
OrganismiChlamydomonas reinhardtii (Chlamydomonas smithii)
Taxonomic identifieri3055 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeChlorophytaChlorophyceaeChlamydomonadalesChlamydomonadaceaeChlamydomonas
ProteomesiUP000006906: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

  1. cell wall Source: EnsemblPlants/Gramene
Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiA8HP06.
ProMEXiA8HP06.

Interactioni

Protein-protein interaction databases

STRINGi3055.JGI394775.

Structurei

3D structure databases

ProteinModelPortaliA8HP06.
SMRiA8HP06. Positions 42-635.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1053.
KOiK00234.

Family and domain databases

Gene3Di1.20.58.100. 1 hit.
3.90.700.10. 1 hit.
InterProiIPR003953. FAD_bind_dom.
IPR003952. FRD_SDH_FAD_BS.
IPR015939. Fum_Rdtase/Succ_DH_flav-like_C.
IPR027477. Succ_DH/fumarate_Rdtase_cat.
IPR011281. Succ_DH_flav_su_fwd.
IPR014006. Succ_Dhase_FrdA_Gneg.
[Graphical view]
PfamiPF00890. FAD_binding_2. 1 hit.
PF02910. Succ_DH_flav_C. 1 hit.
[Graphical view]
SUPFAMiSSF46977. SSF46977. 1 hit.
SSF56425. SSF56425. 1 hit.
TIGRFAMsiTIGR01816. sdhA_forward. 1 hit.
TIGR01812. sdhA_frdA_Gneg. 1 hit.
PROSITEiPS00504. FRD_SDH_FAD_BINDING. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A8HP06-1 [UniParc]FASTAAdd to Basket

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MPVLAKLLGG ASKASSLQQL AGLGQRAALA ATQQAGFASQ SYPVIDHQYD    50
AIVVGAGGAG LRAAVGLSEL GFNTACITKL FPTRSHTVAA QGGINAALGN 100
MTEDDWRWHA YDTIKGSDWL GDQDAIHYMC REAPKAVIEL ENYGLPFSRT 150
EDGKIYQRAF GGQSLDFGKG GQAYRCACAA DRTGHAMLHT LYGQAMKHDI 200
QFYVEYFALD LIMDSDGVCR GVMALCMEDG TLHRFQAHQT VLATGGYGRA 250
YFSATSAHTC TGDGNAMAAR AGIPLQDLEF VQFHPTGIYG AGCLITEGSR 300
GEGGILRNSE GERFMERYAP TAKDLASRDV VSRSMTMEIR EGRGCGPEKD 350
HIYLHLNHLP PELLAERLPG ISETAAIFAG VDVTKEPIPV LPTVHYNMGG 400
VPTNYMGEVL APTPDNPDKV VPGLFAAGEA ACASVHGANR LGANSLLDIV 450
VFGRACANRI GQIMKPNTPH KPLPATAGEG AVARLDKLRN AKGNLRTAEI 500
RRNMQKVMQN NAAVFRTQES LEEGCKLIDE TMASFQDVKT TDRGLVWNTD 550
LIETLELENL LINAAVTMHS AEKRKESRGA HAREDFTQRD DANWMKHTLG 600
FLPSTNDKVN ISYRPVHMKP LSEEMPFIPP KPRVY 635
Length:635
Mass (Da):68,880
Last modified:December 4, 2007 - v1
Checksum:i43DD0434281CE093
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS496108 Genomic DNA. Translation: EDP09580.1.
RefSeqiXP_001689842.1. XM_001689790.1.
UniGeneiCre.3143.

Genome annotation databases

EnsemblPlantsiEDP09580; EDP09580; CHLREDRAFT_195972.
GeneIDi5715870.
KEGGicre:CHLREDRAFT_195972.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS496108 Genomic DNA. Translation: EDP09580.1 .
RefSeqi XP_001689842.1. XM_001689790.1.
UniGenei Cre.3143.

3D structure databases

ProteinModelPortali A8HP06.
SMRi A8HP06. Positions 42-635.
ModBasei Search...

Protein-protein interaction databases

STRINGi 3055.JGI394775.

Proteomic databases

PRIDEi A8HP06.
ProMEXi A8HP06.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi EDP09580 ; EDP09580 ; CHLREDRAFT_195972 .
GeneIDi 5715870.
KEGGi cre:CHLREDRAFT_195972.

Phylogenomic databases

eggNOGi COG1053.
KOi K00234.

Family and domain databases

Gene3Di 1.20.58.100. 1 hit.
3.90.700.10. 1 hit.
InterProi IPR003953. FAD_bind_dom.
IPR003952. FRD_SDH_FAD_BS.
IPR015939. Fum_Rdtase/Succ_DH_flav-like_C.
IPR027477. Succ_DH/fumarate_Rdtase_cat.
IPR011281. Succ_DH_flav_su_fwd.
IPR014006. Succ_Dhase_FrdA_Gneg.
[Graphical view ]
Pfami PF00890. FAD_binding_2. 1 hit.
PF02910. Succ_DH_flav_C. 1 hit.
[Graphical view ]
SUPFAMi SSF46977. SSF46977. 1 hit.
SSF56425. SSF56425. 1 hit.
TIGRFAMsi TIGR01816. sdhA_forward. 1 hit.
TIGR01812. sdhA_frdA_Gneg. 1 hit.
PROSITEi PS00504. FRD_SDH_FAD_BINDING. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The Chlamydomonas genome reveals the evolution of key animal and plant functions."
    Merchant S.S., Prochnik S.E., Vallon O., Harris E.H., Karpowicz S.J., Witman G.B., Terry A., Salamov A., Fritz-Laylin L.K., Marechal-Drouard L., Marshall W.F., Qu L.H., Nelson D.R., Sanderfoot A.A., Spalding M.H., Kapitonov V.V., Ren Q., Ferris P.
    , Lindquist E., Shapiro H., Lucas S.M., Grimwood J., Schmutz J., Cardol P., Cerutti H., Chanfreau G., Chen C.L., Cognat V., Croft M.T., Dent R., Dutcher S., Fernandez E., Fukuzawa H., Gonzalez-Ballester D., Gonzalez-Halphen D., Hallmann A., Hanikenne M., Hippler M., Inwood W., Jabbari K., Kalanon M., Kuras R., Lefebvre P.A., Lemaire S.D., Lobanov A.V., Lohr M., Manuell A., Meier I., Mets L., Mittag M., Mittelmeier T., Moroney J.V., Moseley J., Napoli C., Nedelcu A.M., Niyogi K., Novoselov S.V., Paulsen I.T., Pazour G.J., Purton S., Ral J.P., Riano-Pachon D.M., Riekhof W., Rymarquis L., Schroda M., Stern D., Umen J., Willows R., Wilson N., Zimmer S.L., Allmer J., Balk J., Bisova K., Chen C.J., Elias M., Gendler K., Hauser C., Lamb M.R., Ledford H., Long J.C., Minagawa J., Page M.D., Pan J., Pootakham W., Roje S., Rose A., Stahlberg E., Terauchi A.M., Yang P., Ball S., Bowler C., Dieckmann C.L., Gladyshev V.N., Green P., Jorgensen R., Mayfield S., Mueller-Roeber B., Rajamani S., Sayre R.T., Brokstein P., Dubchak I., Goodstein D., Hornick L., Huang Y.W., Jhaveri J., Luo Y., Martinez D., Ngau W.C., Otillar B., Poliakov A., Porter A., Szajkowski L., Werner G., Zhou K., Grigoriev I.V., Rokhsar D.S., Grossman A.R.
    Science 318:245-250(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CC-503.

Entry informationi

Entry nameiA8HP06_CHLRE
AccessioniPrimary (citable) accession number: A8HP06
Entry historyi
Integrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: May 14, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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