Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Glutamate decarboxylase

Gene

Spea_2953

Organism
Shewanella pealeana (strain ATCC 700345 / ANG-SQ1)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciSPEA398579:GHG5-3096-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Ordered Locus Names:Spea_2953Imported
OrganismiShewanella pealeana (strain ATCC 700345 / ANG-SQ1)Imported
Taxonomic identifieri398579 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000002608 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi398579.Spea_2953.

Structurei

3D structure databases

ProteinModelPortaliA8H6T3.
SMRiA8H6T3. Positions 7-448.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000070228.
KOiK01580.
OMAiDPDLVWD.
OrthoDBiEOG6TFCPW.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

A8H6T3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPLHSKDTVR DDLLDDIYSS SDLALSMPKY KMPEQENNPR HAYQIVHDEL
60 70 80 90 100
MMDGNSRQNL ATFCQTWVED EVHQLMDECI DKNMIDKDEY PQTAELEARC
110 120 130 140 150
VHMLADLWNS PDAENTLGCS TTGSSEAAML GGMALKWAWR KKMKALGKPT
160 170 180 190 200
DKPNMVCGPV QVCWHKFARY WDIELREIPM EGDRLIMNAE EVIKRCDENT
210 220 230 240 250
IGVVPTLGVT FTCQYEPVKA VHDALDKLQK ETGLDIPMHV DAASGGFLAP
260 270 280 290 300
FCQPELEWDF KLPRVKSINA SGHKFGLSPL GVGWVIWRDA SALDEDLIFN
310 320 330 340 350
VNYLGGNMPT FALNFSRPGG QIVAQYYNFL RLGKEGYRKI HQACYDTAQY
360 370 380 390 400
LSSEIEKLGM FEIIYDGHDG IPAMSWSLKE GVDPGFNLFD LSDRIRSRGW
410 420 430 440 450
QIAAYAMPPK REDLVIMRIL VRHGFSRDQA DLLVADLKHC VEFFAEHPIS
460
HGSDAKESSG FNHG
Length:464
Mass (Da):52,490
Last modified:November 13, 2007 - v1
Checksum:i3FF2EA15D50C6F91
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000851 Genomic DNA. Translation: ABV88270.1.
RefSeqiWP_012156174.1. NC_009901.1.
YP_001502805.1. NC_009901.1.

Genome annotation databases

EnsemblBacteriaiABV88270; ABV88270; Spea_2953.
KEGGispl:Spea_2953.
PATRICi23535981. VBIShePea72822_3090.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000851 Genomic DNA. Translation: ABV88270.1.
RefSeqiWP_012156174.1. NC_009901.1.
YP_001502805.1. NC_009901.1.

3D structure databases

ProteinModelPortaliA8H6T3.
SMRiA8H6T3. Positions 7-448.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi398579.Spea_2953.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABV88270; ABV88270; Spea_2953.
KEGGispl:Spea_2953.
PATRICi23535981. VBIShePea72822_3090.

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000070228.
KOiK01580.
OMAiDPDLVWD.
OrthoDBiEOG6TFCPW.

Enzyme and pathway databases

BioCyciSPEA398579:GHG5-3096-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700345 / ANG-SQ1Imported.

Entry informationi

Entry nameiA8H6T3_SHEPA
AccessioniPrimary (citable) accession number: A8H6T3
Entry historyi
Integrated into UniProtKB/TrEMBL: November 13, 2007
Last sequence update: November 13, 2007
Last modified: May 27, 2015
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.