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A8H6T3 (A8H6T3_SHEPA) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Spea_2953 EMBL ABV88270.1
OrganismShewanella pealeana (strain ATCC 700345 / ANG-SQ1) [Complete proteome] [HAMAP] EMBL ABV88270.1
Taxonomic identifier398579 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella

Protein attributes

Sequence length464 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
A8H6T3 [UniParc].

Last modified November 13, 2007. Version 1.
Checksum: 3FF2EA15D50C6F91

FASTA46452,490
        10         20         30         40         50         60 
MPLHSKDTVR DDLLDDIYSS SDLALSMPKY KMPEQENNPR HAYQIVHDEL MMDGNSRQNL 

        70         80         90        100        110        120 
ATFCQTWVED EVHQLMDECI DKNMIDKDEY PQTAELEARC VHMLADLWNS PDAENTLGCS 

       130        140        150        160        170        180 
TTGSSEAAML GGMALKWAWR KKMKALGKPT DKPNMVCGPV QVCWHKFARY WDIELREIPM 

       190        200        210        220        230        240 
EGDRLIMNAE EVIKRCDENT IGVVPTLGVT FTCQYEPVKA VHDALDKLQK ETGLDIPMHV 

       250        260        270        280        290        300 
DAASGGFLAP FCQPELEWDF KLPRVKSINA SGHKFGLSPL GVGWVIWRDA SALDEDLIFN 

       310        320        330        340        350        360 
VNYLGGNMPT FALNFSRPGG QIVAQYYNFL RLGKEGYRKI HQACYDTAQY LSSEIEKLGM 

       370        380        390        400        410        420 
FEIIYDGHDG IPAMSWSLKE GVDPGFNLFD LSDRIRSRGW QIAAYAMPPK REDLVIMRIL 

       430        440        450        460 
VRHGFSRDQA DLLVADLKHC VEFFAEHPIS HGSDAKESSG FNHG 

« Hide

References

[1]"Complete sequence of Shewanella pealeana ATCC 700345."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Kim E., Zhao J.-S.Z., Manno D., Hawari J., Richardson P.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700345 / ANG-SQ1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000851 Genomic DNA. Translation: ABV88270.1.
RefSeqYP_001502805.1. NC_009901.1.

3D structure databases

ProteinModelPortalA8H6T3.
SMRA8H6T3. Positions 7-448.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING398579.Spea_2953.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABV88270; ABV88270; Spea_2953.
GeneID5663343.
KEGGspl:Spea_2953.
PATRIC23535981. VBIShePea72822_3090.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000070228.
KOK01580.
OMAPTFQINF.
OrthoDBEOG6TFCPW.

Enzyme and pathway databases

BioCycSPEA398579:GHG5-3096-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA8H6T3_SHEPA
AccessionPrimary (citable) accession number: A8H6T3
Entry history
Integrated into UniProtKB/TrEMBL: November 13, 2007
Last sequence update: November 13, 2007
Last modified: May 14, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)