Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Pyridoxal-dependent decarboxylase

Gene

Spea_2715

Organism
Shewanella pealeana (strain ATCC 700345 / ANG-SQ1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

  1. carboxy-lyase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. carboxylic acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciSPEA398579:GHG5-2858-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Pyridoxal-dependent decarboxylaseImported
Gene namesi
Ordered Locus Names:Spea_2715Imported
OrganismiShewanella pealeana (strain ATCC 700345 / ANG-SQ1)Imported
Taxonomic identifieri398579 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000002608: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi398579.Spea_2715.

Structurei

3D structure databases

ProteinModelPortaliA8H648.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000282553.
KOiK01580.
OMAiALGAFCS.
OrthoDBiEOG6MSRZP.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

Sequencei

Sequence statusi: Complete.

A8H648-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTARKATASE EALLRIFTVP EAPDSTLSVI EQNISQNLMG FLQESVVAVE
60 70 80 90 100
KPLSEVELDF QQYHIPAAPQ FVSDYADNMM QTLVAHSVHT SAPSFIGHMT
110 120 130 140 150
SALPYFVLPL SKMMVGLNQN LVKIETSKAF TPLERQVLGM MHHLIYNQDE
160 170 180 190 200
TFYQSWMHSA NVSLGAFCSG GTVANITALW TARNQLLKAD GDFKGIAKQG
210 220 230 240 250
LLKGLRHYGY DDLAILVSER GHYSLAKTAD LLGIGRENII QVPTSDDNKV
260 270 280 290 300
DVVKMREIAE QLDKDNIKVM AIVGVAGTTE TGNIDPLNAL ADLAAELNCH
310 320 330 340 350
FHVDAAWGGA SLLSNKYRHL LAGIERADSV TIDAHKQMYV PMGAGMVIFK
360 370 380 390 400
DPTFANAIKH HAEYILRQGS KDLGSQTLEG SRPGMAMLVH ACLKVIGREG
410 420 430 440 450
YEILINNSLE KARYFADLIT AEADFELVSK PELCLLTYRY VPQSVQIAMA
460 470 480 490 500
KAREIGDTAT LAQFNGLLDG LTKFVQKTQR EQGTSFVSRT RINPESHQLM
510 520 530 540
DLKAVVFRVV LANPLTSHDI LQQVLAEQAQ IAKSETHFLP QLLTLAQS
Length:548
Mass (Da):60,336
Last modified:November 13, 2007 - v1
Checksum:i284B6E9DAEB45EE1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000851 Genomic DNA. Translation: ABV88035.1.
RefSeqiYP_001502570.1. NC_009901.1.

Genome annotation databases

EnsemblBacteriaiABV88035; ABV88035; Spea_2715.
GeneIDi5663108.
KEGGispl:Spea_2715.
PATRICi23535485. VBIShePea72822_2842.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000851 Genomic DNA. Translation: ABV88035.1.
RefSeqiYP_001502570.1. NC_009901.1.

3D structure databases

ProteinModelPortaliA8H648.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi398579.Spea_2715.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABV88035; ABV88035; Spea_2715.
GeneIDi5663108.
KEGGispl:Spea_2715.
PATRICi23535485. VBIShePea72822_2842.

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000282553.
KOiK01580.
OMAiALGAFCS.
OrthoDBiEOG6MSRZP.

Enzyme and pathway databases

BioCyciSPEA398579:GHG5-2858-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700345 / ANG-SQ1Imported.

Entry informationi

Entry nameiA8H648_SHEPA
AccessioniPrimary (citable) accession number: A8H648
Entry historyi
Integrated into UniProtKB/TrEMBL: November 13, 2007
Last sequence update: November 13, 2007
Last modified: March 4, 2015
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.