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A8H648 (A8H648_SHEPA) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Spea_2715 EMBL ABV88035.1
OrganismShewanella pealeana (strain ATCC 700345 / ANG-SQ1) [Complete proteome] [HAMAP] EMBL ABV88035.1
Taxonomic identifier398579 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella

Protein attributes

Sequence length548 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
A8H648 [UniParc].

Last modified November 13, 2007. Version 1.
Checksum: 284B6E9DAEB45EE1

FASTA54860,336
        10         20         30         40         50         60 
MTARKATASE EALLRIFTVP EAPDSTLSVI EQNISQNLMG FLQESVVAVE KPLSEVELDF 

        70         80         90        100        110        120 
QQYHIPAAPQ FVSDYADNMM QTLVAHSVHT SAPSFIGHMT SALPYFVLPL SKMMVGLNQN 

       130        140        150        160        170        180 
LVKIETSKAF TPLERQVLGM MHHLIYNQDE TFYQSWMHSA NVSLGAFCSG GTVANITALW 

       190        200        210        220        230        240 
TARNQLLKAD GDFKGIAKQG LLKGLRHYGY DDLAILVSER GHYSLAKTAD LLGIGRENII 

       250        260        270        280        290        300 
QVPTSDDNKV DVVKMREIAE QLDKDNIKVM AIVGVAGTTE TGNIDPLNAL ADLAAELNCH 

       310        320        330        340        350        360 
FHVDAAWGGA SLLSNKYRHL LAGIERADSV TIDAHKQMYV PMGAGMVIFK DPTFANAIKH 

       370        380        390        400        410        420 
HAEYILRQGS KDLGSQTLEG SRPGMAMLVH ACLKVIGREG YEILINNSLE KARYFADLIT 

       430        440        450        460        470        480 
AEADFELVSK PELCLLTYRY VPQSVQIAMA KAREIGDTAT LAQFNGLLDG LTKFVQKTQR 

       490        500        510        520        530        540 
EQGTSFVSRT RINPESHQLM DLKAVVFRVV LANPLTSHDI LQQVLAEQAQ IAKSETHFLP 


QLLTLAQS 

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References

[1]"Complete sequence of Shewanella pealeana ATCC 700345."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Kim E., Zhao J.-S.Z., Manno D., Hawari J., Richardson P.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700345 / ANG-SQ1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000851 Genomic DNA. Translation: ABV88035.1.
RefSeqYP_001502570.1. NC_009901.1.

3D structure databases

ProteinModelPortalA8H648.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING398579.Spea_2715.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABV88035; ABV88035; Spea_2715.
GeneID5663108.
KEGGspl:Spea_2715.
PATRIC23535485. VBIShePea72822_2842.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000282553.
KOK01580.
OMAALGAFCS.
OrthoDBEOG6MSRZP.
ProtClustDBCLSK874231.

Enzyme and pathway databases

BioCycSPEA398579:GHG5-2858-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA8H648_SHEPA
AccessionPrimary (citable) accession number: A8H648
Entry history
Integrated into UniProtKB/TrEMBL: November 13, 2007
Last sequence update: November 13, 2007
Last modified: November 13, 2013
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)