A8H197 (A8H197_SHEPA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Choline dehydrogenase EMBL ABV86334.1
EC=1.1.99.1 EMBL ABV86334.1

Gene names

Ordered Locus Names:

Spea_1007

Organism

Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) [Complete proteome] [HAMAP] EMBL ABV86334.1

Taxonomic identifier

398579 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length	565 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine By similarity. SAAS SAAS007867
Catalytic activity	Choline + acceptor = betaine aldehyde + reduced acceptor. SAAS SAAS007867
Cofactor	FAD By similarity. SAAS SAAS007867
Pathway	Amine and polyamine biosynthesis; betaine biosynthesis via choline pathway; betaine aldehyde from choline (cytochrome c reductase route): step 1/1. SAAS SAAS007867

Ontologies

Keywords
Ligand	FAD SAAS SAAS011533 Flavoprotein SAAS SAAS011533
Molecular function	Oxidoreductase SAAS SAAS007867 EMBL ABV86334.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycine betaine biosynthetic process from choline Inferred from electronic annotation. Source: InterPro
Molecular function	choline dehydrogenase activity Inferred from electronic annotation. Source: EC flavin adenine dinucleotide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A8H197 [UniParc]. Last modified November 13, 2007. Version 1. Checksum: DE003F540A5AE5BC	FASTA	565	62,240
	10 20 30 40 50 60 MTATNPQYDY IIVGAGSAGC VLANRLSADS NNRVLLLETG GSDKSIFIQM PTALSIPMNT 70 80 90 100 110 120 KKYAWQFETD AEPYLDNRRM HCPRGKVLGG SSSINGMVYV RGHARDFDEW QEHGAKNWDY 130 140 150 160 170 180 AHCLPYFKKA ESWAFGEDEY RSVDGPLGVN NGNQMKNPLY KAFVAAGVDA GYLATNDYNG 190 200 210 220 230 240 AQQEGFGPMH MTVKNGVRWS TANAYLRPAM KRENLTVITH AQVHKILFST KQGEANKAVG 250 260 270 280 290 300 VRFERKGKML EVNANKEVVL SAGSIGSPHI LQLSGIGAAD TLGKAGIEQI HELPGVGENL 310 320 330 340 350 360 QDHLEFYFQF KCLKPISLNG KLDPLNKLFI GTRWILNKSG LGATNHFESC GFIRSKAGLE 370 380 390 400 410 420 WPDLQYHFLP AAMRYDGKEA FAGHGFQVHI GHNKPKSRGS VKVVSDDPKQ APSILFNYLS 430 440 450 460 470 480 HQDDIEGFRA CVRLTREIIN QPALDEFRGE EIQPGSSVET DEQIDSFVRS AVESAYHPSC 490 500 510 520 530 540 TCKMGEDAMA VVDSDTRVHG IQGLRVVDSS IFPTIPNGNL NSPTIMLAER AADLILGNTP 550 560 LAPSAAEVVV SQDWQQQQRQ RPPAR

References

[1]

"Complete sequence of Shewanella pealeana ATCC 700345." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. , Kim E., Zhao J.-S.Z., Manno D., Hawari J., Richardson P. Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700345 / ANG-SQ1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000851 Genomic DNA. Translation: ABV86334.1.
RefSeq	YP_001500869.1. NC_009901.1.
3D structure databases
ProteinModelPortal	A8H197.
ModBase	Search...
Protein-protein interaction databases
STRING	A8H197.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5661406.
GenomeReviews	Gene locus Spea_1007 in contig CP000851_GR.
KEGG	spl:Spea_1007.
NMPDR	fig|398579.3.peg.876.
PATRIC	23531693. VBIShePea72822_1049.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2303.
HOGENOM	HBG734713.
OMA	HMTVKNG.
ProtClustDB	PRK02106.
Enzyme and pathway databases
BioCyc	SPEA398579:SPEA_1007-MONOMER.
Family and domain databases
InterPro	IPR011533. Choline_dehydrogenase. IPR012132. GMC_OxRdtase. IPR000172. GMC_OxRdtase_N. IPR007867. GMC_OxRtase_C. [Graphical view]
KO	K00108.
Pfam	PF05199. GMC_oxred_C. 1 hit. PF00732. GMC_oxred_N. 1 hit. [Graphical view]
PIRSF	PIRSF000137. Alcohol_oxidase. 1 hit.
TIGRFAMs	TIGR01810. BetA. 1 hit.
PROSITE	PS00623. GMC_OXRED_1. 1 hit. PS00624. GMC_OXRED_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A8H197_SHEPA

Accession

Primary (citable) accession number: A8H197

Entry history

Integrated into UniProtKB/TrEMBL:	November 13, 2007
Last sequence update:	November 13, 2007
Last modified:	January 25, 2012
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)