Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

A8GKV0

- GLGB_SERP5

UniProt

A8GKV0 - GLGB_SERP5

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

1,4-alpha-glucan branching enzyme GlgB

Gene

glgB

Organism
Serratia proteamaculans (strain 568)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei405 – 4051NucleophileUniRule annotation
Active sitei458 – 4581Proton donorUniRule annotation

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

BioCyciSPRO399741:GI55-4740-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgBUniRule annotation (EC:2.4.1.18UniRule annotation)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferaseUniRule annotation
Alpha-(1->4)-glucan branching enzymeUniRule annotation
Glycogen branching enzymeUniRule annotation
Short name:
BEUniRule annotation
Gene namesi
Name:glgBUniRule annotation
Ordered Locus Names:Spro_4647
OrganismiSerratia proteamaculans (strain 568)
Taxonomic identifieri399741 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSerratia
ProteomesiUP000007074: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7287281,4-alpha-glucan branching enzyme GlgBPRO_1000061993Add
BLAST

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi399741.Spro_4647.

Structurei

3D structure databases

ProteinModelPortaliA8GKV0.
SMRiA8GKV0. Positions 117-728.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0296.
HOGENOMiHOG000283037.
KOiK00700.
OMAiECHQNNI.
OrthoDBiEOG6JX7GT.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

A8GKV0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPVLPDRDVI DQLFSGNSAD PFSLLGMHAA DNGLQVRALL PDASEVWLLE
60 70 80 90 100
QQTGRRLVQL NCDDARGFFS ATVPRRKTPF RYQFEVRWQD HQQIVDDPYR
110 120 130 140 150
FGTLLQDIDS WLLAEGTHLR PYERLGAHLS TLDDVEGVSF AVWAPNAQRV
160 170 180 190 200
SVVGEFNFWD GRRHPMRLRR ENGIWELFLP GVKAGQLYKY EIIDCYGNTQ
210 220 230 240 250
LKADPYAFEA QMRPDTASLV TPLPEVVENT PQRQRANDFD RPISIYEVHL
260 270 280 290 300
GSWRRHTDDN FWLSYGELAV QLIDYVKDMG FTHIELLPIN EHPFDGSWGY
310 320 330 340 350
QPLGLYAPTR RFGTPADFKD FVAAAHRAGI NVILDWVPGH FPSDAYGLAN
360 370 380 390 400
FDGTALYEYA DPREGFHQDW NTLIYNYGRH EVRNYLAGNA LYWLERYGID
410 420 430 440 450
ALRVDAVASM IYRDYSRAEG EWVPNYYGGN ENLEAIAFLR YTNQSVGKER
460 470 480 490 500
PGAVTLAEES TDYPGVTLPP ESNGLGFHYK WNLGWMHDTL NYMQCDPVHR
510 520 530 540 550
KYHHNQMTFG MLYAYTENFV LPISHDEVVH GKKSILDRMP GDAWQKFANL
560 570 580 590 600
RAYYGFMWAH PGKKLLFMGC EFAQGREWNF DSSLDWHLLE GLDGWHHGVQ
610 620 630 640 650
RLVRDLNHCY QQQAPLYERD YRPDGFEWLV VDDHDNSVFA FARYDAHGNE
660 670 680 690 700
LIAVSNFTPV PRHHYRIGIS RPGEYREILN TDSHHYHGSN TGNQGRVVSE
710 720
QIGNHGREHS ISVTVPPLAT IYLLREAQ
Length:728
Mass (Da):83,974
Last modified:November 13, 2007 - v1
Checksum:iE6D985C8D29312AA
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000826 Genomic DNA. Translation: ABV43740.1.
RefSeqiYP_001480868.1. NC_009832.1.

Genome annotation databases

EnsemblBacteriaiABV43740; ABV43740; Spro_4647.
GeneIDi5603141.
KEGGispe:Spro_4647.
PATRICi32422122. VBISerPro44537_4701.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000826 Genomic DNA. Translation: ABV43740.1 .
RefSeqi YP_001480868.1. NC_009832.1.

3D structure databases

ProteinModelPortali A8GKV0.
SMRi A8GKV0. Positions 117-728.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 399741.Spro_4647.

Protein family/group databases

CAZyi CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABV43740 ; ABV43740 ; Spro_4647 .
GeneIDi 5603141.
KEGGi spe:Spro_4647.
PATRICi 32422122. VBISerPro44537_4701.

Phylogenomic databases

eggNOGi COG0296.
HOGENOMi HOG000283037.
KOi K00700.
OMAi ECHQNNI.
OrthoDBi EOG6JX7GT.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci SPRO399741:GI55-4740-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 568.

Entry informationi

Entry nameiGLGB_SERP5
AccessioniPrimary (citable) accession number: A8GKV0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: November 13, 2007
Last modified: October 1, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3