Reviewed, UniProtKB/Swiss-Prot A8GE05 (ARAB_SERP5)

Names and origin

Protein names

Recommended name:
    Ribulokinase
    EC=2.7.1.16

Gene names

Name:	araB
Ordered Locus Names:	Spro_2244

Organism

Serratia proteamaculans (strain 568) [Complete proteome] [HAMAP]

Taxonomic identifier

399741 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Serratia

Protein attributes

Sequence length	561 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Catalytic activity	ATP + L(or D)-ribulose = ADP + L(or D)-ribulose 5-phosphate. HAMAP MF_00520
Pathway	Carbohydrate degradation; L-arabinose degradation via L-ribulose; D-xylulose 5-phosphate from L-arabinose (bacterial route): step 2/3. HAMAP MF_00520
Sequence similarities	Belongs to the ribulokinase family.

Ontologies

Keywords
Biological process	Arabinose catabolism Carbohydrate metabolism
Ligand	ATP-binding Nucleotide-binding
Molecular function	Kinase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	L-arabinose catabolic process Inferred from electronic annotation. Source: HAMAP
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ribulokinase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 561	561	Ribulokinase HAMAP MF_00520		PRO_1000060920

Sequences

	Sequence		Length	Mass (Da)
	A8GE05-1 [UniParc]. Last modified November 13, 2007. Version 1. Checksum: 707F0E0082EA903F	FASTA	561	61,186
	10 20 30 40 50 60 MTAGAIALGL DFGSDSVRVL AVDCHNGAEL DTEVVYYPRW QRGEFCNAAE NRFRHHPLDY 70 80 90 100 110 120 IEAMEQAIVT LVQRMPPQQR LQVIGIGVDS TGSTPAPIDE QGQVLALRPE FADNPNAMFV 130 140 150 160 170 180 LWKDHTAIEE ADAINRLCRS GEFPDYSRYI GGVYSSEWFW AKILHVTRQD AEVRQAAASW 190 200 210 220 230 240 VELCDWVPAL LSATTAPHQL KRGRCSVGHK TLWHPDWGGL PPKAFFAALD PLLVEHLPWP 250 260 270 280 290 300 LFEDCHTADL PVGTLSAEWA ARLGLPTTVV LSGGAFDCHM GAVGAGAQPY TLVKVIGTST 310 320 330 340 350 360 CDILIADRQR VDGRAIEGIC GQVDGSVVPG MIGMEAGQSA FGDMYAWFSR LLSWPLHAAA 370 380 390 400 410 420 KNQPELQPQL QKIEAGLLAA LTDAWVENPS LDHLPVVLDW FNGRRTPYAN QRLKGVIADL 430 440 450 460 470 480 NLGTDAPTLF GGFIAATAFG ARAIMECFEQ QDIPVDNVLA LGGIARKSPA IMQACADVMN 490 500 510 520 530 540 RPLQIVASDQ CCALGAAIFA AVAAGRFISV PEAQRQMACG IERTLQPDPQ RVARYQQLYQ 550 560 RYQQWCQAAE PRYAPTSGSA N

References

[1]

"Complete sequence of chromosome of Serratia proteamaculans 568." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E. , Taghavi S., Newman L., Vangronsveld J., van der Lelie D., Richardson P. Submitted (SEP-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	CP000826 Genomic DNA. Translation: ABV41345.1.
RefSeq	YP_001478473.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A8GE05.
Genome annotation databases
GeneID	5605122.
GenomeReviews	Gene locus Spro_2244 in contig CP000826_GR.
KEGG	spe:Spro_2244.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	NGRRTPD.
Family and domain databases
HAMAP	MF_00520. [Tree]
InterPro	IPR000577. Carb_kinase_FGGY. IPR018485. Carb_kinase_FGGY_C. IPR018484. Carb_kinase_FGGY_N. IPR005929. L_ribulokin. [Graphical view]
PANTHER	PTHR10196. FGGY_kin. 1 hit.
Pfam	PF02782. FGGY_C. 1 hit. PF00370. FGGY_N. 1 hit. [Graphical view]
TIGRFAMs	TIGR01234. L-ribulokinase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

ARAB_SERP5

Accession

Primary (citable) accession number: A8GE05

Entry history

Integrated into UniProtKB/Swiss-Prot:	February 5, 2008
Last sequence update:	November 13, 2007
Last modified:	November 3, 2009
This is version 13 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)