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Protein

Ribulokinase

Gene

araB

Organism
Serratia proteamaculans (strain 568)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + L(or D)-ribulose = ADP + L(or D)-ribulose 5-phosphate.UniRule annotation

Pathwayi: L-arabinose degradation via L-ribulose

This protein is involved in step 2 of the subpathway that synthesizes D-xylulose 5-phosphate from L-arabinose (bacterial route).UniRule annotation
Proteins known to be involved in the 3 steps of the subpathway in this organism are:
  1. L-arabinose isomerase (araA)
  2. Ribulokinase (araB)
  3. no protein annotated in this organism
This subpathway is part of the pathway L-arabinose degradation via L-ribulose, which is itself part of Carbohydrate degradation.
View all proteins of this organism that are known to be involved in the subpathway that synthesizes D-xylulose 5-phosphate from L-arabinose (bacterial route), the pathway L-arabinose degradation via L-ribulose and in Carbohydrate degradation.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionKinase, Transferase
Biological processArabinose catabolism, Carbohydrate metabolism
LigandATP-binding, Nucleotide-binding

Enzyme and pathway databases

UniPathwayiUPA00145; UER00566

Names & Taxonomyi

Protein namesi
Recommended name:
RibulokinaseUniRule annotation (EC:2.7.1.16UniRule annotation)
Gene namesi
Name:araBUniRule annotation
Ordered Locus Names:Spro_2244
OrganismiSerratia proteamaculans (strain 568)
Taxonomic identifieri399741 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesYersiniaceaeSerratia
Proteomesi
  • UP000007074 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000609201 – 561RibulokinaseAdd BLAST561

Interactioni

Protein-protein interaction databases

STRINGi399741.Spro_2244

Structurei

3D structure databases

ProteinModelPortaliA8GE05
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribulokinase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105EF1 Bacteria
COG1069 LUCA
HOGENOMiHOG000236883
KOiK00853
OMAiGVWGPYK
OrthoDBiPOG091H0HTZ

Family and domain databases

CDDicd07781 FGGY_RBK, 1 hit
HAMAPiMF_00520 Ribulokinase, 1 hit
InterProiView protein in InterPro
IPR000577 Carb_kinase_FGGY
IPR018485 Carb_kinase_FGGY_C
IPR005929 Ribulokinase
PfamiView protein in Pfam
PF02782 FGGY_C, 1 hit
PIRSFiPIRSF000538 GlpK, 1 hit
TIGRFAMsiTIGR01234 L-ribulokinase, 1 hit

Sequencei

Sequence statusi: Complete.

A8GE05-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTAGAIALGL DFGSDSVRVL AVDCHNGAEL DTEVVYYPRW QRGEFCNAAE
60 70 80 90 100
NRFRHHPLDY IEAMEQAIVT LVQRMPPQQR LQVIGIGVDS TGSTPAPIDE
110 120 130 140 150
QGQVLALRPE FADNPNAMFV LWKDHTAIEE ADAINRLCRS GEFPDYSRYI
160 170 180 190 200
GGVYSSEWFW AKILHVTRQD AEVRQAAASW VELCDWVPAL LSATTAPHQL
210 220 230 240 250
KRGRCSVGHK TLWHPDWGGL PPKAFFAALD PLLVEHLPWP LFEDCHTADL
260 270 280 290 300
PVGTLSAEWA ARLGLPTTVV LSGGAFDCHM GAVGAGAQPY TLVKVIGTST
310 320 330 340 350
CDILIADRQR VDGRAIEGIC GQVDGSVVPG MIGMEAGQSA FGDMYAWFSR
360 370 380 390 400
LLSWPLHAAA KNQPELQPQL QKIEAGLLAA LTDAWVENPS LDHLPVVLDW
410 420 430 440 450
FNGRRTPYAN QRLKGVIADL NLGTDAPTLF GGFIAATAFG ARAIMECFEQ
460 470 480 490 500
QDIPVDNVLA LGGIARKSPA IMQACADVMN RPLQIVASDQ CCALGAAIFA
510 520 530 540 550
AVAAGRFISV PEAQRQMACG IERTLQPDPQ RVARYQQLYQ RYQQWCQAAE
560
PRYAPTSGSA N
Length:561
Mass (Da):61,186
Last modified:November 13, 2007 - v1
Checksum:i707F0E0082EA903F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000826 Genomic DNA Translation: ABV41345.1
RefSeqiWP_012144974.1, NC_009832.1

Genome annotation databases

EnsemblBacteriaiABV41345; ABV41345; Spro_2244
KEGGispe:Spro_2244

Similar proteinsi

Entry informationi

Entry nameiARAB_SERP5
AccessioniPrimary (citable) accession number: A8GE05
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: November 13, 2007
Last modified: March 28, 2018
This is version 63 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome
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Main funding by: National Institutes of Health