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A8GC96

- A8GC96_SERP5

UniProt

A8GC96 - A8GC96_SERP5

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Protein
Deoxyribose-phosphate aldolase
Gene
deoC, Spro_1632
Organism
Serratia proteamaculans (strain 568)
Status
Unreviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate By similarity.UniRule annotationSAAS annotations

Catalytic activityi

2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde.UniRule annotationSAAS annotations

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei156 – 1561Schiff-base intermediate with acetaldehyde By similarityUniRule annotation
Active sitei185 – 1851 By similarityUniRule annotation

GO - Molecular functioni

  1. deoxyribose-phosphate aldolase activity Source: UniProtKB-HAMAP
Complete GO annotation...

GO - Biological processi

  1. carbohydrate catabolic process Source: UniProtKB-HAMAP
  2. deoxyribonucleotide catabolic process Source: InterPro
  3. deoxyribose phosphate catabolic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotationsImported

Keywords - Ligandi

Schiff baseUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciSPRO399741:GI55-1682-MONOMER.
UniPathwayiUPA00002; UER00468.

Names & Taxonomyi

Protein namesi
Recommended name:
Deoxyribose-phosphate aldolaseUniRule annotation (EC:4.1.2.4UniRule annotation)
Short name:
DERAUniRule annotation
Alternative name(s):
2-deoxy-D-ribose 5-phosphate aldolase
Phosphodeoxyriboaldolase
Gene namesi
Name:deoCUniRule annotation
Ordered Locus Names:Spro_1632Imported
OrganismiSerratia proteamaculans (strain 568)Imported
Taxonomic identifieri399741 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSerratia
ProteomesiUP000007074: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotationSAAS annotations

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotations

Interactioni

Protein-protein interaction databases

STRINGi399741.Spro_1632.

Structurei

3D structure databases

ProteinModelPortaliA8GC96.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0274.
HOGENOMiHOG000241645.
KOiK01619.
OMAiYVYEDIR.
OrthoDBiEOG6QZMW5.

Family and domain databases

Gene3Di3.20.20.70. 1 hit.
HAMAPiMF_00114. DeoC_type1.
InterProiIPR013785. Aldolase_TIM.
IPR011343. DeoC.
IPR002915. DeoC/FbaB/lacD_aldolase.
IPR028581. DeoC_typeI.
[Graphical view]
PANTHERiPTHR10889. PTHR10889. 1 hit.
PfamiPF01791. DeoC. 1 hit.
[Graphical view]
PIRSFiPIRSF001357. DeoC. 1 hit.
TIGRFAMsiTIGR00126. deoC. 1 hit.

Sequencei

Sequence statusi: Complete.

A8GC96-1 [UniParc]FASTAAdd to Basket

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MTTENIDYAR YVDHTLLAMD ATEEQIAKLC EEAQQHNFYA VCVNSGYVPL    50
AAHLLQESEV KICSVIGFPL GAGLTVTKAF EAKAAIAAGA QEIDMVINVG 100
WLKSGLLDEV KADIAAVREV CAAIPLKVIL ETCLLSDAQI VQVCEMCREL 150
DVAFVKTSTG FSTGGAREEH VKLMRATVGS EMGVKASGAV RDRATAEKMI 200
KAGATRIGTS SGVAIVSGDQ AAAGSY 226
Length:226
Mass (Da):23,830
Last modified:November 13, 2007 - v1
Checksum:i6DE727D9910FDE0D
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000826 Genomic DNA. Translation: ABV40736.1.
RefSeqiYP_001477864.1. NC_009832.1.

Genome annotation databases

EnsemblBacteriaiABV40736; ABV40736; Spro_1632.
GeneIDi5603995.
KEGGispe:Spro_1632.
PATRICi32415954. VBISerPro44537_1662.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000826 Genomic DNA. Translation: ABV40736.1 .
RefSeqi YP_001477864.1. NC_009832.1.

3D structure databases

ProteinModelPortali A8GC96.
ModBasei Search...

Protein-protein interaction databases

STRINGi 399741.Spro_1632.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABV40736 ; ABV40736 ; Spro_1632 .
GeneIDi 5603995.
KEGGi spe:Spro_1632.
PATRICi 32415954. VBISerPro44537_1662.

Phylogenomic databases

eggNOGi COG0274.
HOGENOMi HOG000241645.
KOi K01619.
OMAi YVYEDIR.
OrthoDBi EOG6QZMW5.

Enzyme and pathway databases

UniPathwayi UPA00002 ; UER00468 .
BioCyci SPRO399741:GI55-1682-MONOMER.

Family and domain databases

Gene3Di 3.20.20.70. 1 hit.
HAMAPi MF_00114. DeoC_type1.
InterProi IPR013785. Aldolase_TIM.
IPR011343. DeoC.
IPR002915. DeoC/FbaB/lacD_aldolase.
IPR028581. DeoC_typeI.
[Graphical view ]
PANTHERi PTHR10889. PTHR10889. 1 hit.
Pfami PF01791. DeoC. 1 hit.
[Graphical view ]
PIRSFi PIRSF001357. DeoC. 1 hit.
TIGRFAMsi TIGR00126. deoC. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 568Imported.

Entry informationi

Entry nameiA8GC96_SERP5
AccessioniPrimary (citable) accession number: A8GC96
Entry historyi
Integrated into UniProtKB/TrEMBL: November 13, 2007
Last sequence update: November 13, 2007
Last modified: June 11, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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