Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

A8GC96

- A8GC96_SERP5

UniProt

A8GC96 - A8GC96_SERP5

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Deoxyribose-phosphate aldolase

Gene

deoC

Organism
Serratia proteamaculans (strain 568)
Status
Unreviewed - Annotation score: 3 out of 5- Protein inferred from homologyi

Functioni

Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate.UniRule annotationSAAS annotation

Catalytic activityi

2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde.UniRule annotationSAAS annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei156 – 1561Schiff-base intermediate with acetaldehydeUniRule annotation
Active sitei185 – 1851UniRule annotation

GO - Molecular functioni

  1. deoxyribose-phosphate aldolase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbohydrate catabolic process Source: UniProtKB-HAMAP
  2. deoxyribonucleotide catabolic process Source: InterPro
  3. deoxyribose phosphate catabolic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotation

Keywords - Ligandi

Schiff baseUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciSPRO399741:GI55-1682-MONOMER.
UniPathwayiUPA00002; UER00468.

Names & Taxonomyi

Protein namesi
Recommended name:
Deoxyribose-phosphate aldolaseUniRule annotation (EC:4.1.2.4UniRule annotation)
Short name:
DERAUniRule annotation
Alternative name(s):
2-deoxy-D-ribose 5-phosphate aldolaseUniRule annotation
PhosphodeoxyriboaldolaseUniRule annotation
Gene namesi
Name:deoCUniRule annotation
Ordered Locus Names:Spro_1632Imported
OrganismiSerratia proteamaculans (strain 568)Imported
Taxonomic identifieri399741 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSerratia
ProteomesiUP000007074: Chromosome

Subcellular locationi

Cytoplasm UniRule annotationSAAS annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi399741.Spro_1632.

Structurei

3D structure databases

ProteinModelPortaliA8GC96.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0274.
HOGENOMiHOG000241645.
KOiK01619.
OMAiYVYEDIR.
OrthoDBiEOG6QZMW5.

Family and domain databases

Gene3Di3.20.20.70. 1 hit.
HAMAPiMF_00114. DeoC_type1.
InterProiIPR013785. Aldolase_TIM.
IPR011343. DeoC.
IPR002915. DeoC/FbaB/lacD_aldolase.
IPR028581. DeoC_typeI.
[Graphical view]
PANTHERiPTHR10889. PTHR10889. 1 hit.
PfamiPF01791. DeoC. 1 hit.
[Graphical view]
PIRSFiPIRSF001357. DeoC. 1 hit.
TIGRFAMsiTIGR00126. deoC. 1 hit.

Sequencei

Sequence statusi: Complete.

A8GC96-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTTENIDYAR YVDHTLLAMD ATEEQIAKLC EEAQQHNFYA VCVNSGYVPL
60 70 80 90 100
AAHLLQESEV KICSVIGFPL GAGLTVTKAF EAKAAIAAGA QEIDMVINVG
110 120 130 140 150
WLKSGLLDEV KADIAAVREV CAAIPLKVIL ETCLLSDAQI VQVCEMCREL
160 170 180 190 200
DVAFVKTSTG FSTGGAREEH VKLMRATVGS EMGVKASGAV RDRATAEKMI
210 220
KAGATRIGTS SGVAIVSGDQ AAAGSY
Length:226
Mass (Da):23,830
Last modified:November 13, 2007 - v1
Checksum:i6DE727D9910FDE0D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000826 Genomic DNA. Translation: ABV40736.1.
RefSeqiYP_001477864.1. NC_009832.1.

Genome annotation databases

EnsemblBacteriaiABV40736; ABV40736; Spro_1632.
GeneIDi5603995.
KEGGispe:Spro_1632.
PATRICi32415954. VBISerPro44537_1662.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000826 Genomic DNA. Translation: ABV40736.1 .
RefSeqi YP_001477864.1. NC_009832.1.

3D structure databases

ProteinModelPortali A8GC96.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 399741.Spro_1632.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABV40736 ; ABV40736 ; Spro_1632 .
GeneIDi 5603995.
KEGGi spe:Spro_1632.
PATRICi 32415954. VBISerPro44537_1662.

Phylogenomic databases

eggNOGi COG0274.
HOGENOMi HOG000241645.
KOi K01619.
OMAi YVYEDIR.
OrthoDBi EOG6QZMW5.

Enzyme and pathway databases

UniPathwayi UPA00002 ; UER00468 .
BioCyci SPRO399741:GI55-1682-MONOMER.

Family and domain databases

Gene3Di 3.20.20.70. 1 hit.
HAMAPi MF_00114. DeoC_type1.
InterProi IPR013785. Aldolase_TIM.
IPR011343. DeoC.
IPR002915. DeoC/FbaB/lacD_aldolase.
IPR028581. DeoC_typeI.
[Graphical view ]
PANTHERi PTHR10889. PTHR10889. 1 hit.
Pfami PF01791. DeoC. 1 hit.
[Graphical view ]
PIRSFi PIRSF001357. DeoC. 1 hit.
TIGRFAMsi TIGR00126. deoC. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 568Imported.

Entry informationi

Entry nameiA8GC96_SERP5
AccessioniPrimary (citable) accession number: A8GC96
Entry historyi
Integrated into UniProtKB/TrEMBL: November 13, 2007
Last sequence update: November 13, 2007
Last modified: October 29, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3