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A8GC96

- A8GC96_SERP5

UniProt

A8GC96 - A8GC96_SERP5

Protein

Deoxyribose-phosphate aldolase

Gene

deoC

Organism
Serratia proteamaculans (strain 568)
Status
Unreviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 57 (01 Oct 2014)
      Sequence version 1 (13 Nov 2007)
      Previous versions | rss
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    Functioni

    Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate.UniRule annotationSAAS annotation

    Catalytic activityi

    2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde.UniRule annotationSAAS annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei156 – 1561Schiff-base intermediate with acetaldehydeUniRule annotation
    Active sitei185 – 1851UniRule annotation

    GO - Molecular functioni

    1. deoxyribose-phosphate aldolase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. carbohydrate catabolic process Source: UniProtKB-HAMAP
    2. deoxyribonucleotide catabolic process Source: InterPro
    3. deoxyribose phosphate catabolic process Source: UniProtKB-UniPathway

    Keywords - Molecular functioni

    LyaseUniRule annotationSAAS annotationImported

    Keywords - Ligandi

    Schiff baseUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciSPRO399741:GI55-1682-MONOMER.
    UniPathwayiUPA00002; UER00468.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Deoxyribose-phosphate aldolaseUniRule annotation (EC:4.1.2.4UniRule annotation)
    Short name:
    DERAUniRule annotation
    Alternative name(s):
    2-deoxy-D-ribose 5-phosphate aldolaseUniRule annotation
    PhosphodeoxyriboaldolaseUniRule annotation
    Gene namesi
    Name:deoCUniRule annotation
    Ordered Locus Names:Spro_1632Imported
    OrganismiSerratia proteamaculans (strain 568)Imported
    Taxonomic identifieri399741 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSerratia
    ProteomesiUP000007074: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotationSAAS annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmUniRule annotationSAAS annotation

    Interactioni

    Protein-protein interaction databases

    STRINGi399741.Spro_1632.

    Structurei

    3D structure databases

    ProteinModelPortaliA8GC96.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0274.
    HOGENOMiHOG000241645.
    KOiK01619.
    OMAiYVYEDIR.
    OrthoDBiEOG6QZMW5.

    Family and domain databases

    Gene3Di3.20.20.70. 1 hit.
    HAMAPiMF_00114. DeoC_type1.
    InterProiIPR013785. Aldolase_TIM.
    IPR011343. DeoC.
    IPR002915. DeoC/FbaB/lacD_aldolase.
    IPR028581. DeoC_typeI.
    [Graphical view]
    PANTHERiPTHR10889. PTHR10889. 1 hit.
    PfamiPF01791. DeoC. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001357. DeoC. 1 hit.
    TIGRFAMsiTIGR00126. deoC. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    A8GC96-1 [UniParc]FASTAAdd to Basket

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    MTTENIDYAR YVDHTLLAMD ATEEQIAKLC EEAQQHNFYA VCVNSGYVPL    50
    AAHLLQESEV KICSVIGFPL GAGLTVTKAF EAKAAIAAGA QEIDMVINVG 100
    WLKSGLLDEV KADIAAVREV CAAIPLKVIL ETCLLSDAQI VQVCEMCREL 150
    DVAFVKTSTG FSTGGAREEH VKLMRATVGS EMGVKASGAV RDRATAEKMI 200
    KAGATRIGTS SGVAIVSGDQ AAAGSY 226
    Length:226
    Mass (Da):23,830
    Last modified:November 13, 2007 - v1
    Checksum:i6DE727D9910FDE0D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000826 Genomic DNA. Translation: ABV40736.1.
    RefSeqiYP_001477864.1. NC_009832.1.

    Genome annotation databases

    EnsemblBacteriaiABV40736; ABV40736; Spro_1632.
    GeneIDi5603995.
    KEGGispe:Spro_1632.
    PATRICi32415954. VBISerPro44537_1662.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000826 Genomic DNA. Translation: ABV40736.1 .
    RefSeqi YP_001477864.1. NC_009832.1.

    3D structure databases

    ProteinModelPortali A8GC96.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 399741.Spro_1632.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABV40736 ; ABV40736 ; Spro_1632 .
    GeneIDi 5603995.
    KEGGi spe:Spro_1632.
    PATRICi 32415954. VBISerPro44537_1662.

    Phylogenomic databases

    eggNOGi COG0274.
    HOGENOMi HOG000241645.
    KOi K01619.
    OMAi YVYEDIR.
    OrthoDBi EOG6QZMW5.

    Enzyme and pathway databases

    UniPathwayi UPA00002 ; UER00468 .
    BioCyci SPRO399741:GI55-1682-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.70. 1 hit.
    HAMAPi MF_00114. DeoC_type1.
    InterProi IPR013785. Aldolase_TIM.
    IPR011343. DeoC.
    IPR002915. DeoC/FbaB/lacD_aldolase.
    IPR028581. DeoC_typeI.
    [Graphical view ]
    PANTHERi PTHR10889. PTHR10889. 1 hit.
    Pfami PF01791. DeoC. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001357. DeoC. 1 hit.
    TIGRFAMsi TIGR00126. deoC. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 568Imported.

    Entry informationi

    Entry nameiA8GC96_SERP5
    AccessioniPrimary (citable) accession number: A8GC96
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 13, 2007
    Last sequence update: November 13, 2007
    Last modified: October 1, 2014
    This is version 57 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3