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A8G987 (A8G987_SERP5) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.1.21.4 EMBL ABV39677.1
Gene names
Ordered Locus Names:Spro_0571 EMBL ABV39677.1
OrganismSerratia proteamaculans (strain 568) [Complete proteome] [HAMAP] EMBL ABV39677.1
Taxonomic identifier399741 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSerratia

Protein attributes

Sequence length404 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL ABV39677.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA restriction-modification system

Inferred from electronic annotation. Source: InterPro

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: InterPro

Type II site-specific deoxyribonuclease activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A8G987 [UniParc].

Last modified November 13, 2007. Version 1.
Checksum: FBDDE17AF1ED16E1

FASTA40445,643
        10         20         30         40         50         60 
MSDFQNWLTE KSSDNWYIHI KRLSANDTGA SGGHQSGVYL PNNSANFLFP SINRIDEENP 

        70         80         90        100        110        120 
SVGLTAKIIS HEVNDSQVRA VYYNSKLRNL NPKGRNETRI TCWGGQKSPV QNQNNTGAIA 

       130        140        150        160        170        180 
IFAFYTPENL KDCGLVEAWV CCTVEEEDLL EAIIGEVLPG TARSGPSAQI LGGFAIDDSD 

       190        200        210        220        230        240 
WKSHNYSIPD PWKVTFPSGS DIIEYLPNIF KFKGDTPDKL LLERREKEYS LFRQIEEIHV 

       250        260        270        280        290        300 
LDKIKKGFNS VEEFIELANS VSNRRKSRSG KSLEMHLEKI FLANGLTTFT TQSITEGKKK 

       310        320        330        340        350        360 
PDFLFPSGIE YHNPAYPAEN LRMLAVKTTC KDRWRQAINE ANRINNIHLF TLQEGVSANQ 

       370        380        390        400 
FQEMKDAGVT LVVPEPLHKK YPEKIRSELV SLSDFISETL AIYT 

« Hide

References

[1]"Complete sequence of chromosome of Serratia proteamaculans 568."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E. expand/collapse author list , Taghavi S., Newman L., Vangronsveld J., van der Lelie D., Richardson P.
Submitted (SEP-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 568 EMBL ABV39677.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000826 Genomic DNA. Translation: ABV39677.1.
RefSeqYP_001476805.1. NC_009832.1.

3D structure databases

ProteinModelPortalA8G987.
SMRA8G987. Positions 2-399.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING399741.Spro_0571.

Protein family/group databases

REBASE16261. Spr568ORF573P.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABV39677; ABV39677; Spro_0571.
GeneID5606644.
KEGGspe:Spro_0571.
PATRIC32413780. VBISerPro44537_0600.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG29288.
HOGENOMHOG000218988.
KOK01155.
OMARITRWGG.
OrthoDBEOG6GXTXQ.
ProtClustDBCLSK966362.

Enzyme and pathway databases

BioCycSPRO399741:GI55-596-MONOMER.

Family and domain databases

Gene3D2.40.330.10. 1 hit.
InterProIPR015300. DNA-bd_pseudobarrel.
IPR023372. Rest_endonuc_II_EcoRII_N.
IPR011335. Restrct_endonuc-II-like.
IPR015109. Restrct_endonuc_II_EcoRII_C.
[Graphical view]
PfamPF09019. EcoRII-C. 1 hit.
PF09217. EcoRII-N. 1 hit.
[Graphical view]
SUPFAMSSF101936. SSF101936. 1 hit.
SSF52980. SSF52980. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA8G987_SERP5
AccessionPrimary (citable) accession number: A8G987
Entry history
Integrated into UniProtKB/TrEMBL: November 13, 2007
Last sequence update: November 13, 2007
Last modified: April 16, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)