A8G987 (A8G987_SERP5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Type II site-specific deoxyribonuclease EMBL ABV39677.1
EC=3.1.21.4 EMBL ABV39677.1

Gene names

Ordered Locus Names:

Spro_0571 EMBL ABV39677.1

Organism

Serratia proteamaculans (strain 568) [Complete proteome] [HAMAP] EMBL ABV39677.1

Taxonomic identifier

399741 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Serratia › Serratia proteamaculans

Protein attributes

Sequence length	404 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABV39677.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA restriction-modification system Inferred from electronic annotation. Source: InterPro
Molecular_function	DNA binding Inferred from electronic annotation. Source: InterPro Type II site-specific deoxyribonuclease activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A8G987 [UniParc]. Last modified November 13, 2007. Version 1. Checksum: FBDDE17AF1ED16E1	FASTA	404	45,643
	10 20 30 40 50 60 MSDFQNWLTE KSSDNWYIHI KRLSANDTGA SGGHQSGVYL PNNSANFLFP SINRIDEENP 70 80 90 100 110 120 SVGLTAKIIS HEVNDSQVRA VYYNSKLRNL NPKGRNETRI TCWGGQKSPV QNQNNTGAIA 130 140 150 160 170 180 IFAFYTPENL KDCGLVEAWV CCTVEEEDLL EAIIGEVLPG TARSGPSAQI LGGFAIDDSD 190 200 210 220 230 240 WKSHNYSIPD PWKVTFPSGS DIIEYLPNIF KFKGDTPDKL LLERREKEYS LFRQIEEIHV 250 260 270 280 290 300 LDKIKKGFNS VEEFIELANS VSNRRKSRSG KSLEMHLEKI FLANGLTTFT TQSITEGKKK 310 320 330 340 350 360 PDFLFPSGIE YHNPAYPAEN LRMLAVKTTC KDRWRQAINE ANRINNIHLF TLQEGVSANQ 370 380 390 400 FQEMKDAGVT LVVPEPLHKK YPEKIRSELV SLSDFISETL AIYT

References

[1]

"Complete sequence of chromosome of Serratia proteamaculans 568." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E. , Taghavi S., Newman L., Vangronsveld J., van der Lelie D., Richardson P. Submitted (SEP-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 568 EMBL ABV39677.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000826 Genomic DNA. Translation: ABV39677.1.
RefSeq	YP_001476805.1. NC_009832.1.
3D structure databases
ProteinModelPortal	A8G987.
SMR	A8G987. Positions 2-399.
ModBase	Search...
Protein-protein interaction databases
STRING	399741.Spro_0571.
Protein family/group databases
REBASE	16261. Spr568ORF573P.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABV39677; ABV39677; Spro_0571.
GeneID	5606644.
KEGG	spe:Spro_0571.
PATRIC	32413780. VBISerPro44537_0600.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG29288.
HOGENOM	HOG000218988.
KO	K01155.
OMA	RITRWGG.
ProtClustDB	CLSK966362.
Family and domain databases
Gene3D	2.40.330.10. 1 hit.
InterPro	IPR015300. DNA-bd_pseudobarrel. IPR023372. Rest_endonuc_II_EcoRII_N. IPR011335. Restrct_endonuc-II-like. IPR015109. Restrct_endonuc_II_EcoRII_C. [Graphical view]
Pfam	PF09019. EcoRII-C. 1 hit. PF09217. EcoRII-N. 1 hit. [Graphical view]
SUPFAM	SSF52980. Restrict_endonuc_II-like_core. 1 hit. SSF101936. Restrict_endonuc_II_EcoRII_N. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A8G987_SERP5

Accession

Primary (citable) accession number: A8G987

Entry history

Integrated into UniProtKB/TrEMBL:	November 13, 2007
Last sequence update:	November 13, 2007
Last modified:	May 1, 2013
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)