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Protein
Submitted name:

Alpha amylase catalytic region

Gene

Spro_0054

Organism
Serratia proteamaculans (strain 568)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: InterPro
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. alpha-glucan catabolic process Source: InterPro
  2. cellular oligosaccharide catabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciSPRO399741:GI55-54-MONOMER.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase catalytic regionImported
Gene namesi
Ordered Locus Names:Spro_0054Imported
OrganismiSerratia proteamaculans (strain 568)Imported
Taxonomic identifieri399741 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSerratia
ProteomesiUP000007074 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. periplasmic space Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1919 PotentialImportedAdd
BLAST
Chaini20 – 688669 PotentialImportedPRO_5000278928Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi399741.Spro_0054.

Structurei

3D structure databases

ProteinModelPortaliA8G7S4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000273912.
KOiK01176.
OMAiFNWHNAT.
OrthoDBiEOG65QWH3.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

A8G7S4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRLTLPLLM LLSPAAMASW TLQSFPAFDE SASGLFTSHA TLAKGELPLK
60 70 80 90 100
IYQNQQCWQP TTAAKLNQAL SLQPCGDNPP VNWRLFRAGE YQVRIDTRSG
110 120 130 140 150
TPTLQLSLKT APEIAASAVA RTCPRWNGLP VTLDVAATFA EGETVRDFYS
160 170 180 190 200
GQTTNVSQGK VTLQPAAGSG GLLLLESASN EKAAPFNWHN ATVYFALTDR
210 220 230 240 250
FENGNPANDH SYGRRSDGMQ EIGTFHGGDL AGLTKKLDYL QQLGVNALWI
260 270 280 290 300
SSPLEQIHGW VGGGTKGDFP HYAYHGYYAL DWTRLDANMG SEQDLRTLVE
310 320 330 340 350
QAHQRGIRIL FDVVVNHVGY ATLADMQTFQ FGSLYLKGAE IEKTLGKNWG
360 370 380 390 400
DWRPGTGQNW HSFNDYINFS DKAGWDAWWG KNWIRTDIGD YDPPGYDDLT
410 420 430 440 450
MSLAFLPDIK TEASGASGLP LFYRHKPDTA AHEIPGATPR DYLTTWLSQW
460 470 480 490 500
VRDYGIDGFR VDTAKHVEKP TLALLKQRAT AALAEWKAAH PQQALDNAPF
510 520 530 540 550
WMTGEAWGHG VMKSDYYQNG FDAMINFDFQ DQASQALSCF SSIDTTYQQM
560 570 580 590 600
ADKLQDFNVL SYISSHDTRL FFASDAKGSL ALQQRAADLL LLAPGAVQIY
610 620 630 640 650
YGDESGRQLG PSGSDPLQGT RSDMNWSELQ GDKAPLLAHW QRLGQFRARH
660 670 680
PAIGAGKQQS QQTAQYYAFS RRLSDDKVMV VWVGDRSQ
Length:688
Mass (Da):76,357
Last modified:November 13, 2007 - v1
Checksum:i3D43AE3E147B9703
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000826 Genomic DNA. Translation: ABV39164.1.
RefSeqiYP_001476292.1. NC_009832.1.

Genome annotation databases

EnsemblBacteriaiABV39164; ABV39164; Spro_0054.
KEGGispe:Spro_0054.
PATRICi32412718. VBISerPro44537_0096.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000826 Genomic DNA. Translation: ABV39164.1.
RefSeqiYP_001476292.1. NC_009832.1.

3D structure databases

ProteinModelPortaliA8G7S4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi399741.Spro_0054.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABV39164; ABV39164; Spro_0054.
KEGGispe:Spro_0054.
PATRICi32412718. VBISerPro44537_0096.

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000273912.
KOiK01176.
OMAiFNWHNAT.
OrthoDBiEOG65QWH3.

Enzyme and pathway databases

BioCyciSPRO399741:GI55-54-MONOMER.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 568Imported.

Entry informationi

Entry nameiA8G7S4_SERP5
AccessioniPrimary (citable) accession number: A8G7S4
Entry historyi
Integrated into UniProtKB/TrEMBL: November 13, 2007
Last sequence update: November 13, 2007
Last modified: April 1, 2015
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.