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Protein
Submitted name:

Possible ATP-dependent DNA ligase

Gene

P9215_08171

Organism
Prochlorococcus marinus (strain MIT 9215)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciPMAR93060:GI08-844-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Possible ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:P9215_08171Imported
OrganismiProchlorococcus marinus (strain MIT 9215)Imported
Taxonomic identifieri93060 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaProchloralesProchlorococcaceaeProchlorococcus
ProteomesiUP000002014: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi93060.P9215_08171.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK10747.
OMAiMILDSEI.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A8G4A1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLKKFSELF GDLDSINSTN NKIELLKSFF LSNEPIDNSW AIYLLTGKSN
60 70 80 90 100
KRFISGRSLK NIFSQIYEYP QWLIDTCYLK VGDSAEVITL LLKNKTSSRN
110 120 130 140 150
KKLSNISLNE LLSKTIPKLS KLNEEEKNLE IKNLWETLPE DNHLIFNKIL
160 170 180 190 200
TGTFRVGVSI GLITKSISKL INIDEEIISH RLMGNFKPSI DSYEFLINKN
210 220 230 240 250
INLEELNSKP FPFLLANTFE DKIFKNSINN FQFEWKYDGI RIQLIKRSGN
260 270 280 290 300
VSLWTRGQEL VNESFPELVE KMSHIKDNFV LDGELLVWNF KEKIPFDFHF
310 320 330 340 350
LQKRINRKSP TRSIQIKYPI IFIAYDLLEI NGRDIREIKL KNRRIELEKY
360 370 380 390 400
FSKWRNKAEN NITDIFTICD LIYPKDWPDA LTFKEKSREN NTEGLIIKNK
410 420 430 440 450
MSSYTSGRKK GIWWKYKVDP MQLDAVLIYA KGGSGRRAGL YTDYSFALWK
460 470 480 490 500
GQELIKFASA YSGLTNIEIK ELDKWIRKNT IEKFGPVRSL KPEMVFEISF
510 520 530 540
EKIQISKRHK SGIAVRFPRI TKWRKDKKIN DADSLENAYK LMKKIS
Length:546
Mass (Da):63,984
Last modified:November 13, 2007 - v1
Checksum:i85F014F665200D0D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000825 Genomic DNA. Translation: ABV50432.1.
RefSeqiYP_001484018.1. NC_009840.1.

Genome annotation databases

EnsemblBacteriaiABV50432; ABV50432; P9215_08171.
GeneIDi5616418.
KEGGipmh:P9215_08171.
PATRICi22991120. VBIProMar119824_0834.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000825 Genomic DNA. Translation: ABV50432.1.
RefSeqiYP_001484018.1. NC_009840.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi93060.P9215_08171.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABV50432; ABV50432; P9215_08171.
GeneIDi5616418.
KEGGipmh:P9215_08171.
PATRICi22991120. VBIProMar119824_0834.

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK10747.
OMAiMILDSEI.
OrthoDBiEOG6Q8HXT.

Enzyme and pathway databases

BioCyciPMAR93060:GI08-844-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MIT 9215Imported.

Entry informationi

Entry nameiA8G4A1_PROM2
AccessioniPrimary (citable) accession number: A8G4A1
Entry historyi
Integrated into UniProtKB/TrEMBL: November 13, 2007
Last sequence update: November 13, 2007
Last modified: March 4, 2015
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.