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A8G1R3 (A8G1R3_SHESH) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Glycoside hydrolase, family 37 EMBL ABV39036.1
Gene names
Ordered Locus Names:Ssed_4434
OrganismShewanella sediminis (strain HAW-EB3) [Complete proteome] [HAMAP] EMBL ABV39036.1
Taxonomic identifier425104 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length718 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABV39036.1
   Molecular functionHydrolase EMBL ABV39036.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processtrehalose metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionalpha,alpha-trehalase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 1919 Potential EMBL ABV39036.1
Chain20 – 718699 Potential EMBL ABV39036.1
PRO_5000278898

Sequences

Sequence LengthMass (Da)Tools
A8G1R3 [UniParc].

Last modified November 13, 2007. Version 1.
Checksum: BEBDFD38A53234D1

FASTA71881,720
        10         20         30         40         50         60 
MLSCLLLCIS SLTAQTSADY HDLLPYQGTP TSMEERDGKG NLVIPATYVD QGAWHGFHLP 

        70         80         90        100        110        120 
DTPEYFGSFT GPLFIAQEYS LHLSDSLQRL SLKNMDSGKI LDFAQATESR LFSRPDALVQ 

       130        140        150        160        170        180 
QFRWPELSLE MSLSYSDNRT SVIRTRLINN TMSPQHWQLS WSGVPFSSHP KLPEHRVIKR 

       190        200        210        220        230        240 
LDSWKTGIRW RLNSVMETWQ MQLADAEYEI WFDREMRIEL SQEQGYQAST SIISLAGGEH 

       250        260        270        280        290        300 
KEFLSAQRYF HTKAERISHG IPEWNEIGRA LDTNRGRWQR RIDRAISGGD LAYRKMAVKS 

       310        320        330        340        350        360 
MLTLMHNWRS PAGALLHDAV TPSVTYKWFN GVWAWDSWKQ AVALSHFDTD LAKSNVLAMF 

       370        380        390        400        410        420 
DYQFTVEDRV RPQDAGSLPD AIFYNKDPAR GGEGGNWNER NGKPPLATWA VWEIYQQSGD 

       430        440        450        460        470        480 
LEFVELMYPK LVAYHQWWYR NRDHNGNGLA EYGANLHPAH FKDGKPLRGA IIEAAAWESG 

       490        500        510        520        530        540 
MDNAPRFDDD ASVQVLKNLD ENGKLIGFSL SQESVDLNAY LFAEKELLAR MAKLQGLDRE 

       550        560        570        580        590        600 
SSRWAGEAAH LKELIQTRMF DERSGFFYDL RFDDSGSHKM IDAGKGVEGW LPLWAGAASA 

       610        620        630        640        650        660 
LQAKQMVETH LTEQAFATKI PFPTVSADSP NFAATQYWRG PVWLDQALFG LMGLKRYGYD 

       670        680        690        700        710 
TEATRLATRL VEQGEGILQQ APIRENYDPL TGRGLHCTNF SWSASVLLLI YDSWLSRP

« Hide

References

[1]"Complete sequence of Shewanella sediminis HAW-EB3."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Kim E., Zhao J.-S., Richardson P.
Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HAW-EB3.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000821 Genomic DNA. Translation: ABV39036.1.
RefSeqYP_001476164.1. NC_009831.1.

3D structure databases

ProteinModelPortalA8G1R3.
ModBaseSearch...

Protein-protein interaction databases

STRINGA8G1R3.

Protein family/group databases

CAZyGH63. Glycoside Hydrolase Family 63.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5609642.
GenomeReviewsGene locus Ssed_4434 in contig CP000821_GR.
KEGGsse:Ssed_4434.
NMPDRfig|425104.3.peg.3971.
PATRIC23566860. VBISheSed62411_4713.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG16503.
HOGENOMHBG467323.
OMAVAVKAME.
ProtClustDBCLSK962392.

Enzyme and pathway databases

BioCycSSED425104:SSED_4434-MONOMER.

Family and domain databases

InterProIPR008928. 6-hairpin_glycosidase-like.
IPR001661. Glyco_hydro_37.
[Graphical view]
PfamPF01204. Trehalase. 1 hit.
[Graphical view]
SUPFAMSSF48208. Glyco_trans_6hp. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA8G1R3_SHESH
AccessionPrimary (citable) accession number: A8G1R3
Entry history
Integrated into UniProtKB/TrEMBL: November 13, 2007
Last sequence update: November 13, 2007
Last modified: December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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