A8G0Q0 (A8G0Q0_SHESH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Two component transcriptional regulator, fis family EMBL ABV38673.1

Gene names

Ordered Locus Names:

Ssed_4069 EMBL ABV38673.1

Organism

Shewanella sediminis (strain HAW-EB3) [Complete proteome] [HAMAP] EMBL ABV38673.1

Taxonomic identifier

425104 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella › Shewanella sediminis

Protein attributes

Sequence length	200 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Biological process	Transcription Transcription regulation SAAS SAAS002197
Ligand	DNA-binding SAAS SAAS020441
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	intracellular signal transduction Inferred from electronic annotation. Source: GOC transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW phosphorelay response regulator activity Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A8G0Q0 [UniParc]. Last modified November 13, 2007. Version 1. Checksum: 76F18DCC7BA7581A	FASTA	200	22,151
	10 20 30 40 50 60 MSLTNSQAKS KTKPQACSLS KSKKLLIIED DLALAGVLAR RLTRQGFECQ QAHDVTQGLL 70 80 90 100 110 120 LARQFQPSHI LLDMKLDEDN GLSLIEPLRK SLPDVTMVLL TGYASIATAV EAIRMGADNY 130 140 150 160 170 180 LAKPVDTQTL LRALDTAPVD MDVKSVDEVP LNPKRVEWEH IQQVLNANKG NVSATARQLG 190 200 MHRRTLQRKL LKKPAVDHRA

References

[1]

"Complete sequence of Shewanella sediminis HAW-EB3." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. , Kim E., Zhao J.-S., Richardson P. Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: HAW-EB3 EMBL ABV38673.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000821 Genomic DNA. Translation: ABV38673.1.
RefSeq	YP_001475801.1. NC_009831.1.
3D structure databases
ProteinModelPortal	A8G0Q0.
ModBase	Search...
Protein-protein interaction databases
STRING	425104.Ssed_4069.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABV38673; ABV38673; Ssed_4069.
GeneID	5610192.
KEGG	sse:Ssed_4069.
PATRIC	23566050. VBISheSed62411_4324.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG4567.
HOGENOM	HOG000034817.
KO	K15012.
OMA	RVYELCD.
ProtClustDB	CLSK907526.
Family and domain databases
Gene3D	1.10.10.60. 1 hit.
InterPro	IPR011006. CheY-like_superfamily. IPR009057. Homeodomain-like. IPR002197. HTH_Fis. IPR001789. Sig_transdc_resp-reg_receiver. [Graphical view]
Pfam	PF02954. HTH_8. 1 hit. PF00072. Response_reg. 1 hit. [Graphical view]
PRINTS	PR01590. HTHFIS.
SMART	SM00448. REC. 1 hit. [Graphical view]
SUPFAM	SSF52172. CheY_like. 1 hit. SSF46689. Homeodomain_like. 1 hit.
PROSITE	PS50110. RESPONSE_REGULATORY. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A8G0Q0_SHESH

Accession

Primary (citable) accession number: A8G0Q0

Entry history

Integrated into UniProtKB/TrEMBL:	November 13, 2007
Last sequence update:	November 13, 2007
Last modified:	May 1, 2013
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)