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Protein
Submitted name:

Polysulphide reductase, NrfD

Gene

Ssed_3561

Organism
Shewanella sediminis (strain HAW-EB3)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciSSED425104:GH7Q-3691-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Polysulphide reductase, NrfDImported
Gene namesi
Ordered Locus Names:Ssed_3561Imported
OrganismiShewanella sediminis (strain HAW-EB3)Imported
Taxonomic identifieri425104 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000002015 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei15 – 37HelicalSequence analysisAdd BLAST23
Transmembranei49 – 70HelicalSequence analysisAdd BLAST22
Transmembranei90 – 114HelicalSequence analysisAdd BLAST25
Transmembranei144 – 168HelicalSequence analysisAdd BLAST25
Transmembranei180 – 201HelicalSequence analysisAdd BLAST22
Transmembranei221 – 242HelicalSequence analysisAdd BLAST22
Transmembranei254 – 274HelicalSequence analysisAdd BLAST21
Transmembranei286 – 307HelicalSequence analysisAdd BLAST22

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi425104.Ssed_3561.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105DVI. Bacteria.
COG3301. LUCA.
HOGENOMiHOG000278536.
KOiK04015.
OMAiLAFNLWM.
OrthoDBiPOG091H0R7A.

Family and domain databases

InterProiIPR017566. NrfD.
IPR005614. NrfD_fam.
[Graphical view]
PfamiPF03916. NrfD. 1 hit.
[Graphical view]
TIGRFAMsiTIGR03148. cyt_nit_nrfD. 1 hit.

Sequencei

Sequence statusi: Complete.

A8FZ92-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSAFHFDGLV WHWPIAIYLF LAGLSAGAVF FGILLKHFKL GKKAYQSRFI
60 70 80 90 100
QAAALIAPVT VCAGLGILVL DLTKPFDFWK ILVFYNSTSV MSMGVLVLMV
110 120 130 140 150
YQLMLFAWIG AIFSTPVVQW CEGREGRWSL LTSSLIKLQQ WEDVITGILL
160 170 180 190 200
ILSLSLGAYT GFLLSALIGF PLLNNPVLPV LFLVSGLSSG AAATLLVGVL
210 220 230 240 250
LKGNPNGTEV RFIHGIEIPM ILIEMAILFT FFAGLILSGG QSQVAALDAL
260 270 280 290 300
GEGFWGWIFW GGVVGLGLTL PLAFNLWMKV SADRKFAYVA VTASFSLVGV
310
LLLRNFILYT GQMTGT
Length:316
Mass (Da):34,338
Last modified:November 13, 2007 - v1
Checksum:iDB3291279A7C09F1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000821 Genomic DNA. Translation: ABV38165.1.
RefSeqiWP_012143895.1. NC_009831.1.

Genome annotation databases

EnsemblBacteriaiABV38165; ABV38165; Ssed_3561.
KEGGisse:Ssed_3561.
PATRICi23564948. VBISheSed62411_3775.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000821 Genomic DNA. Translation: ABV38165.1.
RefSeqiWP_012143895.1. NC_009831.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi425104.Ssed_3561.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABV38165; ABV38165; Ssed_3561.
KEGGisse:Ssed_3561.
PATRICi23564948. VBISheSed62411_3775.

Phylogenomic databases

eggNOGiENOG4105DVI. Bacteria.
COG3301. LUCA.
HOGENOMiHOG000278536.
KOiK04015.
OMAiLAFNLWM.
OrthoDBiPOG091H0R7A.

Enzyme and pathway databases

BioCyciSSED425104:GH7Q-3691-MONOMER.

Family and domain databases

InterProiIPR017566. NrfD.
IPR005614. NrfD_fam.
[Graphical view]
PfamiPF03916. NrfD. 1 hit.
[Graphical view]
TIGRFAMsiTIGR03148. cyt_nit_nrfD. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiA8FZ92_SHESH
AccessioniPrimary (citable) accession number: A8FZ92
Entry historyi
Integrated into UniProtKB/TrEMBL: November 13, 2007
Last sequence update: November 13, 2007
Last modified: November 2, 2016
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.