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A8FZ92 (A8FZ92_SHESH) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Ssed_3561 EMBL ABV38165.1
OrganismShewanella sediminis (strain HAW-EB3) [Complete proteome] [HAMAP] EMBL ABV38165.1
Taxonomic identifier425104 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella

Protein attributes

Sequence length316 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
A8FZ92 [UniParc].

Last modified November 13, 2007. Version 1.
Checksum: DB3291279A7C09F1

FASTA31634,338
        10         20         30         40         50         60 
MSAFHFDGLV WHWPIAIYLF LAGLSAGAVF FGILLKHFKL GKKAYQSRFI QAAALIAPVT 

        70         80         90        100        110        120 
VCAGLGILVL DLTKPFDFWK ILVFYNSTSV MSMGVLVLMV YQLMLFAWIG AIFSTPVVQW 

       130        140        150        160        170        180 
CEGREGRWSL LTSSLIKLQQ WEDVITGILL ILSLSLGAYT GFLLSALIGF PLLNNPVLPV 

       190        200        210        220        230        240 
LFLVSGLSSG AAATLLVGVL LKGNPNGTEV RFIHGIEIPM ILIEMAILFT FFAGLILSGG 

       250        260        270        280        290        300 
QSQVAALDAL GEGFWGWIFW GGVVGLGLTL PLAFNLWMKV SADRKFAYVA VTASFSLVGV 

       310 
LLLRNFILYT GQMTGT 

« Hide

References

[1]"Complete sequence of Shewanella sediminis HAW-EB3."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Kim E., Zhao J.-S., Richardson P.
Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HAW-EB3 EMBL ABV38165.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000821 Genomic DNA. Translation: ABV38165.1.
RefSeqYP_001475293.1. NC_009831.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING425104.Ssed_3561.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABV38165; ABV38165; Ssed_3561.
GeneID5611718.
KEGGsse:Ssed_3561.
PATRIC23564948. VBISheSed62411_3775.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3301.
HOGENOMHOG000278536.
KOK04015.
OMAMSAFHFD.
OrthoDBEOG6ZWJDG.

Enzyme and pathway databases

BioCycSSED425104:GH7Q-3694-MONOMER.

Family and domain databases

InterProIPR017566. NrfD.
IPR005614. NrfD_fam.
[Graphical view]
PfamPF03916. NrfD. 1 hit.
[Graphical view]
TIGRFAMsTIGR03148. cyt_nit_nrfD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA8FZ92_SHESH
AccessionPrimary (citable) accession number: A8FZ92
Entry history
Integrated into UniProtKB/TrEMBL: November 13, 2007
Last sequence update: November 13, 2007
Last modified: May 14, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)