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A8FX14

- A8FX14_SHESH

UniProt

A8FX14 - A8FX14_SHESH

Protein
Submitted name:

Pyridoxal-dependent decarboxylase

Gene

Ssed_2780

Organism
Shewanella sediminis (strain HAW-EB3)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 45 (01 Oct 2014)
      Sequence version 1 (13 Nov 2007)
      Previous versions | rss
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    Functioni

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. carboxy-lyase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. carboxylic acid metabolic process Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotation

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciSSED425104:GH7Q-2878-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Pyridoxal-dependent decarboxylaseImported
    Gene namesi
    Ordered Locus Names:Ssed_2780Imported
    OrganismiShewanella sediminis (strain HAW-EB3)Imported
    Taxonomic identifieri425104 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
    ProteomesiUP000002015: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi425104.Ssed_2780.

    Structurei

    3D structure databases

    ProteinModelPortaliA8FX14.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0076.
    HOGENOMiHOG000282553.
    KOiK01580.
    OMAiARYFRQP.
    OrthoDBiEOG6MSRZP.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    A8FX14-1 [UniParc]FASTAAdd to Basket

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    MTARQAKASE EALLRIFTIP EAPGSTLSVI EQNISQNLMG FLQESVVAVE    50
    KPLTEIERDF QEHQIPAAPK FVSDYADEMM KTLVAHSVHT SAPSFIGHMT 100
    SALPYFVLPL SKMMVGLNQN LVKIETSKAF TPLERQVLGM MHHLIYDENE 150
    TFYNSWMHSA NVSLGAFCSG GTVANITALW TARNQLLKAD GDFKGIAAQG 200
    LMKGLRHYGY NDLAILVSER GHYSLGKTAD LLGIGRENII QIPTSNDNRV 250
    DVDKMRVTAK ALERDNIKVM AIVGVAGTTE TGNIDPLDKL ATLAEELDCH 300
    FHVDAAWGGA SLLSKKYRHL LKGIERADSV TIDAHKQMYV PMGAGMVIFK 350
    DPTFANAIKH HAEYILRKGS KDLGSQTLEG SRPGMAMLVH ACLQIIGRDG 400
    YEILINNSLE KARYFAELIK TTDNFELVSE PELCLLTYRY VPESVQKAMQ 450
    QARTDGDIER LLQFNRLLDG LTKFVQKRQR EQGTSFVSRT RINPEHCHDI 500
    DVDLKSVVFR VVLANPLTTN EILQQVLVEQ TQIASTDKKF LPQLLELAAH 550
    Length:550
    Mass (Da):61,233
    Last modified:November 13, 2007 - v1
    Checksum:i4FD770E36B681AE3
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000821 Genomic DNA. Translation: ABV37387.1.
    RefSeqiYP_001474515.1. NC_009831.1.

    Genome annotation databases

    EnsemblBacteriaiABV37387; ABV37387; Ssed_2780.
    GeneIDi5613093.
    KEGGisse:Ssed_2780.
    PATRICi23563239. VBISheSed62411_2958.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000821 Genomic DNA. Translation: ABV37387.1 .
    RefSeqi YP_001474515.1. NC_009831.1.

    3D structure databases

    ProteinModelPortali A8FX14.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 425104.Ssed_2780.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABV37387 ; ABV37387 ; Ssed_2780 .
    GeneIDi 5613093.
    KEGGi sse:Ssed_2780.
    PATRICi 23563239. VBISheSed62411_2958.

    Phylogenomic databases

    eggNOGi COG0076.
    HOGENOMi HOG000282553.
    KOi K01580.
    OMAi ARYFRQP.
    OrthoDBi EOG6MSRZP.

    Enzyme and pathway databases

    BioCyci SSED425104:GH7Q-2878-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR03799. NOD_PanD_pyr. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HAW-EB3Imported.

    Entry informationi

    Entry nameiA8FX14_SHESH
    AccessioniPrimary (citable) accession number: A8FX14
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 13, 2007
    Last sequence update: November 13, 2007
    Last modified: October 1, 2014
    This is version 45 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3