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A8FVU5 (A8FVU5_SHESH) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Ssed_2359
OrganismShewanella sediminis (strain HAW-EB3) [Complete proteome] [HAMAP] EMBL ABV36968.1
Taxonomic identifier425104 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella

Protein attributes

Sequence length469 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processfolic acid-containing compound biosynthetic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionoxo-acid-lyase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A8FVU5 [UniParc].

Last modified November 13, 2007. Version 1.
Checksum: 8A91159D5D218DD9

FASTA46952,383
        10         20         30         40         50         60 
MSFSPQQQLA FRHLNWKYTT TELFSHLADK PWAMLLDSAD AAHLDAKFDI IVCDPIATIV 

        70         80         90        100        110        120 
TDGQSSRVNH LQDGEIADSQ VHSGDPFTLL NDTINHYFPH QYPSPLPFSG GAVGCFSYDL 

       130        140        150        160        170        180 
GRQIEHLPQI AARDILLPEM NVGLYPWALI FDRLNACWTL AHYHGEAPLE STLAQLNTLL 

       190        200        210        220        230        240 
EAKPNSVTGD FSLTSQWINQ ITKSQYIEKF DKIQSYLNSG DCYQINLTQR FTASYRGDEW 

       250        260        270        280        290        300 
RAYLKLRETN RAPFSAFIRL DDAAILSISP ERFIQLRDGQ VQTKPIKGTR PRFENAEADT 

       310        320        330        340        350        360 
SSALELAESE KDRAENLMIV DLLRNDIGKV AKAGSVKVPH LFQIDSFPAV HHLVSTVTAE 

       370        380        390        400        410        420 
LHNKYQATDL LKAAFPGGSI TGAPKIRAMQ IIEELEPSRR SLYCGSIGYI SQDGQMDTSI 

       430        440        450        460 
TIRTLVAQAN HIHCWAGGGI VADSQANDEY QETFDKVSKI LPVLEKVDS 

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References

[1]"Complete sequence of Shewanella sediminis HAW-EB3."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Kim E., Zhao J.-S., Richardson P.
Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HAW-EB3.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000821 Genomic DNA. Translation: ABV36968.1.
RefSeqYP_001474096.1. NC_009831.1.

3D structure databases

ProteinModelPortalA8FVU5.
SMRA8FVU5. Positions 11-466.
ModBaseSearch...

Protein-protein interaction databases

STRINGA8FVU5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5612970.
GenomeReviewsGene locus Ssed_2359 in contig CP000821_GR.
KEGGsse:Ssed_2359.
NMPDRfig|425104.3.peg.2095.
PATRIC23562348. VBISheSed62411_2523.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0147.
HOGENOMHBG507440.
OMAHNRFDIL.
ProtClustDBCLSK2328511.

Enzyme and pathway databases

BioCycSSED425104:SSED_2359-MONOMER.

Family and domain databases

InterProIPR005801. ADC_synthase.
IPR019999. Anth_synth_I.
IPR006805. Anth_synth_I_N.
IPR015890. Chorismate-bd_C.
IPR005802. Para-NH2Bz_synth_comp_1.
[Graphical view]
Gene3DG3DSA:3.60.120.10. TRPE_1_chor_bd. 1 hit.
KOK01665.
PfamPF04715. Anth_synt_I_N. 1 hit.
PF00425. Chorismate_bind. 1 hit.
[Graphical view]
PRINTSPR00095. ANTSNTHASEI.
SUPFAMSSF56322. TRPE_1_chor_bd. 1 hit.
TIGRFAMsTIGR00553. PabB. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA8FVU5_SHESH
AccessionPrimary (citable) accession number: A8FVU5
Entry history
Integrated into UniProtKB/TrEMBL: November 13, 2007
Last sequence update: November 13, 2007
Last modified: December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)