A8FRU3 (RL27_SHESH) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L27

Gene names

Name:	rpmA
Ordered Locus Names:	Ssed_0955

Organism

Shewanella sediminis (strain HAW-EB3) [Complete proteome] [HAMAP]

Taxonomic identifier

425104 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella › Shewanella sediminis

Protein attributes

Sequence length	84 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L27P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: InterPro
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 84	84	50S ribosomal protein L27 HAMAP-Rule MF_00539		PRO_1000081913

Sequences

	Sequence		Length	Mass (Da)
	A8FRU3 [UniParc]. Last modified November 13, 2007. Version 1. Checksum: A6FA66B745FE865F	FASTA	84	9,077
	10 20 30 40 50 60 MAHKKAGGST RNGRDSESKR LGVKRFGGES VLAGNIIVRQ RGTKFHAGVN VGIGRDHTLF 70 80 ALTDGKVKFE VKGPKNRKFI SIEG

References

[1]

"Complete sequence of Shewanella sediminis HAW-EB3." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. , Kim E., Zhao J.-S., Richardson P. Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: HAW-EB3.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000821 Genomic DNA. Translation: ABV35566.1.
RefSeq	YP_001472694.1. NC_009831.1.
3D structure databases
ProteinModelPortal	A8FRU3.
SMR	A8FRU3. Positions 2-84.
ModBase	Search...
Protein-protein interaction databases
STRING	425104.Ssed_0955.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABV35566; ABV35566; Ssed_0955.
GeneID	5612546.
KEGG	sse:Ssed_0955.
PATRIC	23559204. VBISheSed62411_1013.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0211.
HOGENOM	HOG000111610.
KO	K02899.
OMA	DGIVKFE.
ProtClustDB	PRK05435.
Enzyme and pathway databases
BioCyc	SSED425104:GH7Q-980-MONOMER.
Family and domain databases
HAMAP	MF_00539. Ribosomal_L27.
InterPro	IPR001684. Ribosomal_L27. IPR018261. Ribosomal_L27_CS. [Graphical view]
PANTHER	PTHR15893. PTHR15893. 1 hit.
Pfam	PF01016. Ribosomal_L27. 1 hit. [Graphical view]
PRINTS	PR00063. RIBOSOMALL27.
ProDom	PD003114. Ribosomal_L27. 1 hit. [Graphical view] [Entries sharing at least one domain]
SUPFAM	SSF110324. Ribosomal_L27. 1 hit.
TIGRFAMs	TIGR00062. L27. 1 hit.
PROSITE	PS00831. RIBOSOMAL_L27. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL27_SHESH

Accession

Primary (citable) accession number: A8FRU3

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 20, 2008
Last sequence update:	November 13, 2007
Last modified:	May 29, 2013
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program