A8FRQ7 (A8FRQ7_SHESH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Nucleotide sugar dehydrogenase EMBL ABV35530.1

Gene names

Ordered Locus Names:

Ssed_0919

Organism

Shewanella sediminis (strain HAW-EB3) [Complete proteome] [HAMAP] EMBL ABV35530.1

Taxonomic identifier

425104 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length	388 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	NAD binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A8FRQ7 [UniParc]. Last modified November 13, 2007. Version 1. Checksum: 66813416DA6F446B	FASTA	388	43,367
	10 20 30 40 50 60 MKVVIVGTGY VGLSNAIILA QNNEVVACDI DEERVNALNN RRSPIVDKEA DEYLANRELN 70 80 90 100 110 120 LTATLDKESA FKDAQYVIVA TPTDYDPETN YFNTSSVESV IKEVIGLNPD ATIVIKSTVP 130 140 150 160 170 180 VGYTKRLSEK LGCNNIIFSP EFLREGRAVH DNLYPSRIVI GEHSERAEIF ANMLVEGAIK 190 200 210 220 230 240 KDIPLLFTDA TEAEAIKLFS NTYLAMRVAY FNELDTYAET HGLSSRQIIE GVGLDPRIGS 250 260 270 280 290 300 HYNNPSFGYG GYCLPKDTKQ LLANYQDVPN NLISAIVDAN VTRKDFIADA IIKQKPETVG 310 320 330 340 350 360 LYRLIMKSGS DNFRASSILG IMKRIKAKGI KVVVYEPVMK EKEFFHSEVI EDLNAFKQMS 370 380 DVIVSNRMMD ELSDVEDRVY TRDLFGSD

References

[1]

"Complete sequence of Shewanella sediminis HAW-EB3." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. , Kim E., Zhao J.-S., Richardson P. Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: HAW-EB3.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000821 Genomic DNA. Translation: ABV35530.1.
RefSeq	YP_001472658.1. NC_009831.1.
3D structure databases
ProteinModelPortal	A8FRQ7.
ModBase	Search...
Protein-protein interaction databases
STRING	A8FRQ7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5613257.
GenomeReviews	Gene locus Ssed_0919 in contig CP000821_GR.
KEGG	sse:Ssed_0919.
NMPDR	fig|425104.3.peg.817.
PATRIC	23559122. VBISheSed62411_0972.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1004.
HOGENOM	HBG400967.
OMA	LNFRATT.
Enzyme and pathway databases
BioCyc	SSED425104:SSED_0919-MONOMER.
Family and domain databases
InterPro	IPR008927. 6-PGluconate_DH_C-like. IPR013328. DH_multihelical. IPR016040. NAD(P)-bd_dom. IPR017476. Nucleotide_sugar_DH. IPR014027. UDP-Glc/GDP-Man_DH_C. IPR014026. UDP-Glc/GDP-Man_DH_dimer. IPR001732. UDP-Glc/GDP-Man_DH_N. [Graphical view]
Gene3D	G3DSA:3.40.50.720. NAD(P)-bd. 1 hit. G3DSA:1.10.1040.10. Opine_DH. 1 hit. G3DSA:3.40.50.1870. UDP-Glc/GDP-Man_DH_C. 1 hit.
KO	K00012.
Pfam	PF00984. UDPG_MGDP_dh. 1 hit. PF03720. UDPG_MGDP_dh_C. 1 hit. PF03721. UDPG_MGDP_dh_N. 1 hit. [Graphical view]
PIRSF	PIRSF000124. UDPglc_GDPman_dh. 1 hit.
SMART	SM00984. UDPG_MGDP_dh_C. 1 hit. [Graphical view]
SUPFAM	SSF48179. 6DGDH_C_like. 1 hit. SSF52413. UDP-Glc/GDP-Man_DH_C. 1 hit.
TIGRFAMs	TIGR03026. NDP-sugDHase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A8FRQ7_SHESH

Accession

Primary (citable) accession number: A8FRQ7

Entry history

Integrated into UniProtKB/TrEMBL:	November 13, 2007
Last sequence update:	November 13, 2007
Last modified:	January 25, 2012
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)