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A8FPF1 (A8FPF1_SHESH) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Glycosyl transferase, family 25 EMBL ABV34724.1
Gene names
Ordered Locus Names:Ssed_0111
OrganismShewanella sediminis (strain HAW-EB3) [Complete proteome] [HAMAP] EMBL ABV34724.1
Taxonomic identifier425104 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length252 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionTransferase EMBL ABV34724.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processlipopolysaccharide biosynthetic process

Inferred from electronic annotation. Source: InterPro

   Molecular functiontransferase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A8FPF1 [UniParc].

Last modified November 13, 2007. Version 1.
Checksum: E4252A193744F57A

FASTA25229,492
        10         20         30         40         50         60 
MKFKVYIINL DSSVDRWEQL SSQCDQMGIE YERVSAVRGS ELTEQERAKV YDLPTNLEKY 

        70         80         90        100        110        120 
DKRLNDGEIG CYLSHIKCWE KIIEEELDFA LILEDDVSLR ENIKECIAQF FSMDSSDWDY 

       130        140        150        160        170        180 
IKLFHRKRLK MKVASLNLDE GVQLHKVAKL PASTCSQFVS QVGAKKLLKH SFPIARPVDV 

       190        200        210        220        230        240 
DIQYWFEREL RCFVVSPPVA VPAGFDSEID IIGQHRDYVQ RRAFKRIWLR VIYEINVLLN 

       250 
TFKLSPFPKM KG

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References

[1]"Complete sequence of Shewanella sediminis HAW-EB3."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Kim E., Zhao J.-S., Richardson P.
Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HAW-EB3.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000821 Genomic DNA. Translation: ABV34724.1.
RefSeqYP_001471852.1. NC_009831.1.

3D structure databases

ModBaseSearch...

Protein family/group databases

CAZyGT25. Glycosyltransferase Family 25.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5612858.
GenomeReviewsGene locus Ssed_0111 in contig CP000821_GR.
KEGGsse:Ssed_0111.
NMPDRfig|425104.3.peg.101.
PATRIC23557366. VBISheSed62411_0118.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3306.
HOGENOMHBG682497.
OMAYAYPIRM.
ProtClustDBCLSK953369.

Enzyme and pathway databases

BioCycSSED425104:SSED_0111-MONOMER.

Family and domain databases

InterProIPR002654. Glyco_trans_25.
[Graphical view]
KOK07270.
PfamPF01755. Glyco_transf_25. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA8FPF1_SHESH
AccessionPrimary (citable) accession number: A8FPF1
Entry history
Integrated into UniProtKB/TrEMBL: November 13, 2007
Last sequence update: November 13, 2007
Last modified: December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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